KEGG   Thermosphaera aggregans: Tagg_1407
Entry
Tagg_1407         CDS       T01237                                 
Name
(GenBank) DNA-directed RNA polymerase, subunit B'; DNA-directed RNA polymerase, subunit B'
  KO
K13798  DNA-directed RNA polymerase subunit B [EC:2.7.7.6]
Organism
tag  Thermosphaera aggregans
Pathway
tag03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tag00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Tagg_1407
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tag03021]
    Tagg_1407
Enzymes [BR:tag01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Tagg_1407
Transcription machinery [BR:tag03021]
 Prokaryotic type
  Archaeal type
   RNA polymerase
    Core subunits
     Tagg_1407
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_5 DDR_swiveling
Other DBs
NCBI-ProteinID: ADG91667
UniProt: D5U3G7
Position
complement(1311011..1314502)
AA seq 1163 aa
MASQLTVDDLWLVMKKYFEEKGLVRQHLDSYDRFIRELLPEMLKEFKEIPITEDVKITIV
DYRIEEPKWITLEGIPERKTPMECRLRNLTYAAPVMVKIKYVDESGRSKEQELKLMDLPV
MLKSSIDPLSKMTPEELTSIGEDPKDPGGYFIINGSEKVLVAQEDLASNNIITDVAPEGS
SYTHLAKIISVSKGKRSQLVIERRKDGTFYANFQGHKIPVIVLMKALGLVGEDEILYAVS
LNSDIQLHMFPSIQEVSKIFPREPLPEGLSPEEEERVLRERREKEVEEALDYIGSRIAIG
RPREERIRRALRALDENLLPHIGTDPSPETRIKKAVFIGQMISRIIELHLGFREPDDKDH
YRNKRLKLAGDLLSVLLRTALLAFTRDLKESAEKYLAKNRKLDLKMVVKPSVITDRILHA
MATGNWPGGKTGVSQLLDRTNMLSTLSHLRRVVSPLSRGQPHFEARELHGTQWGRMCPFE
TPEGANIGLVKNLALMVNVSVGVPESEIEPILYKHQVKPLITITDRATGKTVKGILDEVK
EAVRKYGGELPSEYEGWSKVYLNGRLIGYHPNGEELVKELRKMRRQGKLSPEVNIAHIKT
EYLDEVYVNTDPGRIRRPLLVVEKGEIKLTRTHLEKLRKGEISFEDLVHKGIIEYLDPDE
EENAYIALSIDNITSEHTHAEIWIPAILGITASIIPYPEHNQSPRNMYQAAMAKQSLGLY
SANFQKRMDTRGHFLHYPQKPLVQTRSMEVIGYNERPAGQNMVVAVLTFTGYNIEDALIM
NKSSADRGLARSTFFRLYSTVEYKYMGGQQDEIVIPPTNIRGYRGLRAYEKLEEDGIVAP
ETQVAGGDVLVGKISPPRFLGAQEYMLGAGLTKQDTSVVMRHEEKGIVDTVLITTDNEGN
KLVKVRVRDLRIPELGDKFASRHGQKGVLGLLVPQYDMPFTEDGVVPDLVINPHAFPSRM
TVGQLIESIAGKVAALEGRVVDATPFHKTPVKDLEIVLKRHRYLPSGEEVMYDGRTGEMI
SSPVFIGIVYYQKLHHMVSDKVHARARGPVQILTRQPTEGRSRAGGLRWGEMEVDCLVGH
GTSLLLRETILDRSDITRVYVCEICGHIGWYDRNKGKYLCPIHKEKGSLKPVEISYAFKL
LLQELMSFGVKPRLVVKDVRKEV
NT seq 3492 nt   +upstreamnt  +downstreamnt
atggcatcccaattaacagttgacgatctctggctagttatgaaaaaatatttcgaggag
aaggggcttgtaaggcagcacctcgacagttacgacaggtttatccgtgaactcctgcct
gagatgctgaaggagtttaaggagatccccatcaccgaggacgtgaagatcacgattgtt
gactaccgtattgaggagccgaagtggattactctggagggaatacctgagcggaagacg
ccaatggagtgtaggctgagaaacctcacatacgctgcccctgtaatggttaagataaaa
tatgttgacgaaagcggaaggtctaaggagcaggagttaaagctgatggatctacccgtt
atgttgaaatccagtatcgacccgttaagcaagatgacccctgaggaactcacctcgata
ggcgaggatccgaaggatcctggaggctatttcataattaacggtagcgagaaggtgttg
gtggctcaggaagacctggcaagcaacaacattatcaccgatgtggcgccggaggggtcg
tcttacactcacctagccaagataataagtgtttcgaaaggcaagagatcccagctcgtc
atagagcggaggaaggatggaacattctacgctaacttccagggacataagatacccgtg
attgttctgatgaaagcccttggcctagtgggggaggatgaaatcctctatgctgtcagc
ctcaactcagatattcagctacacatgttcccctcaatacaggaggtttctaagatcttt
ccgagagagccgctaccagagggcctctcccccgaggaagaggagcgagttttaagggag
agaagggagaaggaggttgaggaggcgttagactacataggctcaaggatagcgataggc
aggcctagggaggagagaataagaagggcgctgagagcgctggatgaaaacctcctccca
cacataggaaccgacccaagccctgagacaagaattaagaaggctgttttcatcggacag
atgatctcgagaataatcgagctccaccttggattcagggagcctgatgataaggatcac
tatagaaataagaggctcaagctcgccggagatctgctctccgttctgcttaggacagcc
ctgctggctttcacccgggatttaaaggagagcgctgagaagtacctggcgaagaacagg
aagctagaccttaaaatggttgtgaaacccagcgtgataaccgacagaatccttcacgca
atggcgactgggaactggcccggtggcaaaacaggcgtcagccagctactcgacaggact
aacatgctcagcaccctaagccatttaagaagggttgtgtcaccgctttcaaggggtcaa
ccccacttcgaggctagagagcttcacgggactcaatggggcaggatgtgcccgtttgaa
acgcccgagggagctaacatcggccttgttaaaaaccttgcgctaatggttaatgtcagc
gtgggcgttcccgagtcggagatagaaccaatactctacaagcaccaggttaaacctttg
atcacgataactgatagggcaacgggcaagacggtgaaaggaatactggacgaggttaaa
gaggccgtgagaaaatacggcggagaactccccagtgagtacgagggctggagcaaggta
tatctcaacggcaggttgatcggttaccatccaaacggggaggagcttgttaaagagcta
agaaagatgaggaggcagggcaagctcagcccagaagttaacatcgcccatattaagaca
gaatatctcgacgaggtatacgtgaacactgacccgggcaggatcaggagacccctgcta
gtagttgagaagggagagatcaagctcacgcgcacacacctggagaagcttaggaagggt
gaaatcagcttcgaagaccttgttcacaaggggattatagagtatttagaccctgacgag
gaagagaacgcttacattgctctctcgatcgacaacattacatcagagcacacgcatgcc
gagatctggataccggcgatacttgggataacggcgtcgataatcccctatccagagcac
aatcaaagcccgagaaacatgtaccaggccgcgatggccaagcagagcctggggctctac
tcagcaaacttccaaaagagaatggacaccaggggtcacttcctccactacccgcagaaa
ccattggttcaaacccgctcgatggaggttatagggtataatgagaggccagcagggcag
aacatggtagtagccgtgttaacgttcacagggtataacatcgaggacgcgctcatcatg
aacaagagcagcgctgacagagggcttgcgagaagcacgttcttcaggctatactcaacg
gttgaatacaagtacatgggcggtcagcaggacgagatagttatacctccaaccaatatt
agaggatacaggggcctcagggcttacgagaagctggaggaggacggcatcgtagcccct
gagacccaggtggcagggggagatgttctagtaggaaagataagccccccgagattcctc
ggagcccaagaatacatgcttggagccgggttgactaagcaggatacaagcgtggtgatg
aggcatgaggagaagggcattgtcgacacagtgcttataacaaccgataacgagggaaac
aagcttgtcaaggttcgtgtgagagatctaaggatacctgagctcggggacaagtttgct
tcaagacatggccagaagggagtcctagggttactggttccacagtacgatatgcccttc
acggaggatggggttgtcccagaccttgtcataaacccgcacgccttcccgagccgtatg
accgttggccagttgattgaaagcatagcggggaaggttgctgctctcgagggaagggtt
gtagatgctacgccattccataaaacccctgttaaagaccttgaaatagtgttgaaaaga
caccgctacctcccctctggagaggaggtaatgtatgatggcaggacgggcgagatgata
tcgtcgccagtgttcatcggcatagtctattatcagaaactacaccacatggtcagcgat
aaagtccacgctagggcgagaggccctgttcaaatactcacaaggcagccaaccgaggga
cgctcgagagccggcgggctgagatggggtgagatggaggttgactgcctagtaggacat
ggcacctccctactgctaagggagacaatacttgacaggagcgacataaccagggtctac
gtctgcgagatttgcggacatattggatggtatgatagaaacaagggcaagtacctgtgc
ccgatacataaggaaaagggctccctaaaacccgttgaaatctcctacgcgttcaaactc
ctcctccaggagctcatgagcttcggggttaagcctagactggttgttaaagatgtgaga
aaggaggtgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (39)   

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