KEGG   Candidatus Nitrosotenuis cloacae: SU86_003120
Entry
SU86_003120       CDS       T03883                                 
Name
(GenBank) TATA box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
tah  Candidatus Nitrosotenuis cloacae
Pathway
tah03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:tah00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    SU86_003120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tah03000]
    SU86_003120
   03021 Transcription machinery [BR:tah03021]
    SU86_003120
Transcription factors [BR:tah03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    SU86_003120
Transcription machinery [BR:tah03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     SU86_003120
  RNA polymerase III system
    TFIIIB
     SU86_003120
  RNA polymerase I system
    SL1/TIF-1B
     SU86_003120
SSDB
Motif
Pfam: TBP DUF3378 B3_4
Other DBs
NCBI-ProteinID: AJZ75529
UniProt: A0A3G1B691
Position
1083854..1084414
AA seq 186 aa
MPQTKPIVSIENVVASASVDQKMDLNEITRNFPDVEYHPDQFPGLVFRLKSPKTATLIFT
SGKMVCTGAKSEEMARSAVKSVVQKLRKGGIKVKKDAVVDIQNIVASINLGGKIHLEQAA
RTLPRSMYEPEQFPGLIHRMLDPKTVILLFSSGKLVCTGAKKEPDVYRSVNNLHSLLEEK
NLMIYD
NT seq 561 nt   +upstreamnt  +downstreamnt
atgccacaaacaaagccgatagtaagcatcgaaaacgtagttgcttctgcttcagtggat
cagaaaatggaccttaatgagattactcgtaattttccagatgtagagtatcatccagat
caatttcctggcttggtctttagactaaagagtcccaagactgcaaccttgattttcacc
tctggcaagatggtctgtactggtgcaaaatcagaagagatggcacgaagtgcagtcaag
tcggttgttcaaaagctcagaaagggcggaatcaaagtcaaaaaagacgcagtagttgat
atccaaaacattgttgcatcaattaatctgggtggaaaaattcacctagagcaggcagca
agaaccctaccacgcagcatgtacgagccagaacaatttccaggcctgattcaccgaatg
cttgatccaaaaaccgtgatcctgcttttctcatccggaaagctagtgtgcacaggtgcc
aaaaaagagccagatgtatatcgctccgttaacaacctacactcgctactagaagaaaag
aatctaatgatctacgactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (28)   

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