KEGG   Thermovibrio ammonificans: Theam_1026
Entry
Theam_1026        CDS       T01391                                 
Name
(GenBank) protein of unknown function UPF0027
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
tam  Thermovibrio ammonificans
Brite
KEGG Orthology (KO) [BR:tam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tam03016]
    Theam_1026
Enzymes [BR:tam01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     Theam_1026
Transfer RNA biogenesis [BR:tam03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    Theam_1026
 Prokaryotic type
   tRNA splicing ligases
    Theam_1026
SSDB
Motif
Pfam: RtcB SRP19
Other DBs
NCBI-ProteinID: ADU96993
UniProt: E8T298
Position
1002038..1003219
AA seq 393 aa
MALEPEVIEGRVPIYIYAKEVEPEVRAQIERIKDLPFFRDKIVIMPDCHAGKGCVIGFTG
YFDDVVIPNIVGVDIGCGVYTYPLGIKVDRGNPKEDINLPKFDAFVKGNIPTGLTSRSKK
NAKKLPLTKEDKELLSEIRSLLINTYRIELNEPLLQVGTLGSGNHFLELGVDQEGELYLT
VHTGSRNLGLRVCNHFQRKAKEYTKKVMPELPADLAFLPLNKGGREYLKAMRLAQRYADL
NRRTILKIIVEEFFKQEFKEEKLIKSVHNYIDLERDLCVRKGAISAHRGERVVIPFNLTT
GLVIGRGKGVRSLNCSAPHGAGRKVSRRKAKEQFTVSEFRKAVEEAGVYSSTVSKETLDE
APFAYKDPNEILEFLPKTVEIERFVKPIYNLKG
NT seq 1182 nt   +upstreamnt  +downstreamnt
atggcccttgaacccgaagttatagagggaagggttcccatttacatttacgccaaagag
gttgagcccgaagtgagggctcagatagagaggattaaagaccttcctttcttccgggat
aagattgtgataatgcccgactgccacgccgggaaggggtgtgttatcgggtttaccggc
tacttcgacgatgttgtcattcctaacattgtgggcgttgatatagggtgcggggtttac
acctacccgctgggaataaaagtagacaggggaaaccccaaggaagacatcaacctgcca
aagtttgacgctttcgttaagggaaacatcccaacagggcttacttcacggagtaaaaag
aacgccaaaaagctaccgctaacaaaagaggataaagagcttctatccgaaatacgctcc
ctcctcataaacacctacagaattgagctgaacgagcccctcttgcaggtggggaccctc
ggaagcggaaaccacttcttagagctgggagtagaccaggagggggagctttatttaacg
gtccacaccggctcgaggaatttgggactgagggtgtgcaaccacttccagaggaaggcc
aaagagtacacgaaaaaggtgatgcccgaactcccggcagaccttgcctttctgcccctg
aacaaaggagggagggagtacctaaaggcgatgcggctggcccagcggtatgcagaccta
aacaggaggacgattctgaaaattattgtagaggagttcttcaaacaggagtttaaagag
gagaagctgattaagagcgtccacaactacatagaccttgaaagggacctctgcgtaagg
aagggggcaatttcggcccacagaggcgagagggttgttattccctttaacctgacaaca
gggctcgtaataggaaggggaaaaggagtaaggagcctgaactgctctgcacctcacggg
gccggcaggaaagtgagcagaaggaaggcaaaggaacagtttacggtatcggagttcaga
aaggccgttgaagaggcgggagtttactcttcaaccgtttcgaaggagaccctcgacgag
gctccctttgcctacaaggacccgaacgagattttagagttcctgccaaaaaccgttgag
attgagagattcgtaaaacccatatacaacttaaagggttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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