KEGG   Thermovibrio ammonificans: Theam_1748
Entry
Theam_1748        CDS       T01391                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
tam  Thermovibrio ammonificans
Brite
KEGG Orthology (KO) [BR:tam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tam03032]
    Theam_1748
   03400 DNA repair and recombination proteins [BR:tam03400]
    Theam_1748
Enzymes [BR:tam01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Theam_1748
DNA replication proteins [BR:tam03032]
 Prokaryotic type
  DNA Topoisomerases
   Theam_1748
DNA repair and recombination proteins [BR:tam03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Theam_1748
SSDB
Motif
Pfam: Topoisom_bac Toprim Toprim_2
Other DBs
NCBI-ProteinID: ADU97704
UniProt: E8T6Y3
Position
pTHEAM01:15020..16966
AA seq 648 aa
MLVIVESPTKAKKIQSFLGKGYTVKASLGHVRDLPPDEFAVSIEALEQGKFPFKFKVLAG
KGRVVKELQRLASGELVLCASDPDREGEAIAWHLAQLLKEKAKEVKRIEFHEITKKALQE
AVKRPREIDLNRVRAQFARRAIDRILGYLISPELSKELGKRGLSAGRVQSTALAEIVKRE
REIKEFVPKPYWVVEVELEKDGKKFRARTEKFWDKKEAQENLRFPTLLVIRADKRKKLEK
PKAPFTASALQQEANRLFKWSPEYTMKVAQELFENGYITYHRSDSPRLSEEAVGFLRNLI
PRLFGKDYLPAKPFVYKAKEGAQDAHEAIRPTKLTPEGAPENLKDRLTPQQLKLYTLIWK
RTLASQMKEAVWNTQTVVLQNDRGVKFTAKGKTLVFEGWRKVYDAEVEEDGEGILPELRV
GEKLPAKLRLKEDKTKPPARYTEGSLVKWLEKTGVGRPSTYASTVKTLKARKYVVVKGGK
MVPTETAFRVIEFLEEKHPWILSPELTAQMEKQLDLVEQGKLDWRKPVLETVEKVRELLP
LLSEERDDRPTEKQLEFARSLAEKLKKELPADVLLSKKKLSKWIDGAKRELAKEKANAPL
SEKQVAVIEKHGDEKVREALLRGDYAYCRKWLDGFFRELKRSGRRKKK
NT seq 1947 nt   +upstreamnt  +downstreamnt
gtgctggtaatcgttgagtctcccaccaaggcaaagaaaatccagtcctttttaggcaaa
ggctacacggttaaggccagtttaggccacgtcagagacctgcccccagacgaatttgca
gtctcaatagaggctttagagcaggggaagtttcccttcaagttcaaagtccttgcgggc
aaaggcagagtggttaaggagcttcagaggctcgcctccggggagctcgttctctgtgcc
tcagacccggatagagaaggggaggccatcgcttggcacttagcccagctactcaaagaa
aaggctaaagaggttaaaaggattgagttccacgaaataacgaagaaagccctccaagag
gccgtaaagaggcccagggagatagacctcaacagagtccgtgcccagttcgcaaggagg
gcgatagacaggatactgggctacctgattagccctgaactctcaaaggagctgggcaaa
agaggcctctctgcgggcagagttcagtcaaccgctttggcagaaatcgtcaagagagag
cgggagataaaagagttcgtccccaagccctactgggtggttgaggtagagcttgagaaa
gacggcaaaaagttcagggcaaggactgagaagttctgggacaagaaagaggctcaggaa
aacctcaggttccccacgctccttgtaatcagggccgataagagaaagaaacttgaaaag
cccaaggctccctttacagcctcagctctccagcaggaggccaaccgtctctttaagtgg
agccctgaatacactatgaaggtggctcaggagctatttgagaacggttacataacctac
caccgttcagactccccgaggctgtctgaagaagccgtcggctttttaaggaacctaatc
ccccgccttttcggcaaggactaccttcctgcaaagcctttcgtttataaggccaaagag
ggagctcaggacgcccacgaggcaattaggccgactaaactcaccccggagggagctccc
gaaaacctcaaggacaggctcactcctcagcagctaaagctctacacccttatctggaaa
agaacgcttgcctcacaaatgaaagaggccgtctggaatactcaaacggtagttctgcaa
aacgacaggggagtcaagttcacggcaaagggcaagaccctcgtctttgagggctggagg
aaggtttacgacgctgaagtggaggaagacggagagggaattcttccagagctcagggtc
ggggagaagctccctgcgaagctcaggctcaaggaggacaagacaaagcccccggcccgc
tacaccgaaggttctttagttaagtggctggagaaaactggagtgggccgtccctcaacc
tacgcttctacggtgaagaccctgaaggcaagaaagtacgttgtcgttaagggcggcaag
atggttccaacggagacggccttccgggtgattgagttccttgaggaaaaacacccgtgg
atactctcacctgagctgaccgcccagatggaaaaacagcttgaccttgtggagcagggg
aaacttgactggagaaagcctgttctggagacggtggagaaggttagggagcttctgcct
ctcctatcggaagaaagggacgacaggcctaccgagaaacagcttgagtttgcccgcagt
ttggctgagaagctcaagaaagagctccctgccgacgttctcctctccaagaagaagctc
tcaaagtggatagacggggcaaagagggagcttgccaaggaaaaggccaatgctccgctg
tctgaaaaacaggttgccgtcatagagaagcacggcgacgaaaaggtcagggaagccctc
ctgaggggcgactacgcctactgccgaaagtggcttgacgggtttttcagggagctgaag
aggagcgggaggaggaagaagaagtga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (51)   
   KEGG ORTHOLOGY (1)   
   RefGene (48)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (61)   

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