KEGG   Theileria annulata: TA07925
Entry
TA07925           CDS       T00253                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit, putative
  KO
K03010  DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
Organism
tan  Theileria annulata
Pathway
tan03020  RNA polymerase
tan03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    TA07925
  09124 Replication and repair
   03420 Nucleotide excision repair
    TA07925
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tan03021]
    TA07925
   03400 DNA repair and recombination proteins [BR:tan03400]
    TA07925
Enzymes [BR:tan01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     TA07925
Transcription machinery [BR:tan03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     TA07925
DNA repair and recombination proteins [BR:tan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      TA07925
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_4 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 3862959
NCBI-ProteinID: XP_953007
UniProt: Q4U9X1
Position
4:complement(675544..679792)
AA seq 1223 aa
MDSDFYFSTTQHVSGSERLSESQLITSTYSEYSPEKYNIEQDLDHSQYLKRDDENFTEED
TWKVIGSFFNEHGLVHQQIESFNDFITYRMQEIIDSHPPIEITPQPNYRPEEEVENSVVY
KLKFGQLSLSKPSVEEKDGVFKHIWPQEARLRNLTYASQVYIDIEQETYINEDGKLTQTD
STVYPRVPLCRMPMMHKSSYCWTRGLNDQDLSDIGECVFDQGGYFVVNGGERVLIAQERM
ANNFVYVFNKKNSKYSAVAQLRSQPDFIQGVTSLTIMISNSQLTKNKMVAVLPYIRSDIP
VPILFRALGCISDRDILQRIVYDFSDTQMLSLMRSSLEECSEYTSQEQCLDFIGKRGPTV
GALQEERLNFAKETLRRHFLPHVGTEVGSESKKCFYLGYMIHRLLLNQLGRINEDDREHF
GKKRLDLAGSLMASSFGTLFRKLAKDVERFLKNQIDSGRSFDVAGAIKSCSQITQGLQYQ
LLTGTHSKIIKIKFILLKKFTIWNWGRDKDGNVVRTGVSQVLNRLTFASYLSHLRRLNTP
LGREGKMAKPRQLHNTHWGMICPAETPEGQAVGLVKNLALMCYISVGSLSSTILDFLLEF
GMDSLDEISPILIKDRVKIFLNGTWVGVFNQPDSLVNVLLELRRKGNISSETSIVRDIMS
NEIKIFTDSGRSMRPLYIVENNRLLITKRHANMIENNQLTWSGLMETGVVEYIDCEEEEI
CMIAMFPDDLVNNNNYCNSYTHCEIHPSMILGVCASIIPFPDQNQSPRNTYQSAMGKQAM
GVYSTNYNLRMDTLSHVLYYPQKPLVCTRSMEFLRFRELPAGINSIVAIMCYTGYNQEDS
LIMNQSSIDRGLFRSVFNRTYSSEEKYLGSTVIESFTKPTSTGKFLNLKRGDYSKLDNDG
LIEPGSRVLGDDIIIGRSSPVESDPNNPQYTPEMNLRMDCSCCLRPNENGVVDNVLLTVN
NKGCKFTKVKVRSIRVPQIGDKFASRHGQKGTIGMTFRMEDLPFTCDGIVPDIIMNPHAV
PSRMTIGHLIECLLGKVGSLVGMEGDATPFSKMTLEQISNRLFKCRYSRYGNEAFHNGFT
GNLMASKIFVGPTYYQRLKHMVEDKIHARARGPVTMLTRQPTEGRSREGGLRFGEMERDC
MISHGAAKMLKERLFDQSDAYRVHVCNFCGLLSVANLNNSSFQCTACDNKTQISQVTIPY
ACKLLLQELMAMAIYPKLILTEA
NT seq 3672 nt   +upstreamnt  +downstreamnt
atggattctgatttttatttttctaccacacaacatgtttctggatcggaaaggttatca
gaatctcaacttatcaccagcacctattccgaatattcaccagaaaaatataatatcgaa
caggatctcgatcactctcaatatttaaagcgtgatgatgaaaattttacagaagaagat
acctggaaggtcataggttcattttttaatgaacacggactagtacaccaacaaattgaa
agctttaatgatttcataacataccgtatgcaagagattatagactcacaccctccaatc
gagatcacaccgcaaccaaattatcgaccagaagaggaggtggaaaatagtgtagtgtac
aagttaaaattcggccaactatcgctaagcaagccttcagtagaggagaaggacggagtg
tttaaacacatatggccacaagaagcgagactgagaaatctaacatacgcctcgcaagta
tatattgatattgaacaggaaacatacattaatgaagatggaaaacttacacaaacagac
tcaacagtgtacccaagagtacccctgtgtagaatgccaatgatgcacaagtcgtcatac
tgctggacgagaggacttaatgatcaggatttgtcagacataggagagtgtgtatttgat
caaggaggctactttgttgtgaacggaggagagagggttttaatagcacaggagagaatg
gcgaacaatttcgtctatgttttcaataaaaaaaattcaaaatattcagcagtagcacag
cttaggtcacagcctgatttcatacagggagttacatcacttacaatcatgatttcaaat
tcccaactcaccaaaaataagatggtggcagtactcccgtacataagaagcgacatacca
gttcccatacttttcagagcacttgggtgtatctcagacagggatatactccagagaata
gtctacgatttctcagatacacaaatgctgtccttgatgagatcaagtctcgaagaatgc
tcagaatacacctcacaagaacagtgcctggacttcataggtaaaagaggcccgacagtg
ggagcacttcaggaggaaagactaaatttcgcaaaggaaacactacgccgacattttttg
ccgcacgttggaacggaggtggggtctgagtcgaaaaagtgcttttacctgggttacatg
atacacaggttgctcctaaaccagctgggacgtataaatgaagatgacagagaacatttc
gggaaaaaaagactggatctagcgggatcactgatggcaagtagttttggaactttgttt
agaaagttggctaaggatgtagaaaggttcctaaaaaatcaaattgattcaggacgctca
tttgacgtggcaggagcgattaaatcctgctcacaaataacgcaaggattacaatatcaa
ctactaacaggtacacatagtaaaataattaagataaaatttattttattaaagaaattt
acaatatggaactggggaagagataaggatggaaatgtagtgagaacaggagtctcacaa
gtactcaatagactaacgtttgcgtcatatttgtcacatctgaggaggctgaatacacca
ctaggaagagaaggaaaaatggcgaaaccaagacagttacataatacacactggggaatg
atctgcccagcagaaacaccagaaggtcaagcagttggtttggtcaagaacctagcgttg
atgtgttacatcagtgtgggaagcctgtcaagcacaatcctggactttctgctggagttc
ggaatggactcccttgacgaaatcagcccaattttgataaaggatagagtaaagatattc
ctgaatggtacctgggtaggagttttcaaccagccagattcgttagtaaacgtactgctg
gagctgagaaggaagggaaatataagcagcgaaacatcaatagtgagagatatcatgtca
aacgagattaaaatattcacagattcagggcgatcaatgaggccattgtatatagttgag
aataacagactgttgataacaaagagacatgctaatatgatagaaaataatcaattgacc
tggtcaggtctcatggaaactggagtggtagaatatatcgattgcgaggaggaggaaata
tgcatgatagcaatgttcccagacgaccttgttaataataacaactactgtaacagttac
acgcactgtgaaatacacccgagtatgatactgggagtgtgtgcatcaattataccattc
ccagaccagaaccaaagcccaaggaacacctaccagtcagcaatgggaaaacaagcaatg
ggggtgtatagcaccaactataatctaagaatggatacactaagccatgtgctgtattac
ccacagaaaccactagtgtgcacaagatcaatggagtttttaaggttcagagaactccca
gcaggaattaactccatagtggcaattatgtgctacacaggttacaaccaggaagattca
ctaattatgaatcagtcttcaattgatagaggactgttcagatcagtgtttaacaggaca
tattcatcagaggaaaagtacttgggaagtaccgtcatcgagtcattcaccaaaccaaca
tcaacagggaaattcttaaatttgaaaagaggagattactcgaaactagataacgatgga
cttatagagccaggaagcagagtattgggagatgatatcataataggaaggtcgtcacca
gtggaatcagacccaaataacccacaatacacgcctgaaatgaacttgagaatggactgc
agctgttgtctgagacccaacgaaaacggagtggtggataacgtgctcctaacagtaaac
aacaagggatgtaaatttacaaaggtcaaggtgagaagtatcagagtaccacaaatagga
gataagttcgcaagcagacatggccagaaaggaacaataggaatgacatttagaatggaa
gacctcccattcacgtgtgacggaatagtaccagacattattatgaacccacacgcagtg
ccgtcaagaatgacaataggtcacctgattgagtgtttactaggtaaagttggatctcta
gttggtatggaaggcgacgcaacaccattcagtaaaatgacactagaacagatttctaac
cgtttgttcaagtgtagatactcaagatacggaaatgaagcattccataacggattcaca
ggtaatttgatggccagtaagatattcgttggcccaacatactaccaaaggctgaaacat
atggtagaggataaaatacacgccagggccagaggcccagtaacaatgttgacgagacaa
ccaactgaaggacgctcaagagaaggtgggctcagattcggagaaatggaacgtgactgt
atgatatcacatggagcggcgaagatgctcaaggaaagactgtttgaccagtcagatgca
tatagagtacacgtatgcaatttctgcggactattatcggtagccaacctaaacaacagc
tccttccagtgcacagcctgcgacaacaagacccaaatctcccaagtcacaattccctac
gcctgcaaactacttctacaggaattaatggcaatggcaatttacccaaagctaatttta
actgaagcctag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (116)   
   KEGG ORTHOLOGY (1)   
   RefGene (112)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (134)   

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