KEGG   Thiomicrospira aerophila: THIAE_00325
Entry
THIAE_00325       CDS       T03589                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
tao  Thiomicrospira aerophila
Pathway
tao03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tao00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    THIAE_00325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tao03021]
    THIAE_00325
   03400 DNA repair and recombination proteins [BR:tao03400]
    THIAE_00325
Enzymes [BR:tao01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     THIAE_00325
Transcription machinery [BR:tao03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     THIAE_00325
DNA repair and recombination proteins [BR:tao03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      THIAE_00325
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AHF00392
UniProt: W0DPK3
Position
complement(80298..80522)
AA seq 74 aa
MARVTVEDCLQNVENRFELVLVSAKRARQLGNGADACVAWENDKPTVVALRELAENLVEP
SVILADPDTPPYFS
NT seq 225 nt   +upstreamnt  +downstreamnt
atggctcgcgtaaccgtcgaagactgcttacaaaatgttgaaaaccgctttgaactcgta
ttagtaagtgccaagcgcgcccgtcaattaggcaatggtgccgatgcctgtgtggcctgg
gaaaatgacaagcctaccgttgtcgctttgcgtgaattggctgaaaacctcgttgagcca
tcggttatcctagctgacccagacaccccgccttactttagctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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