KEGG   Thermococcus barophilus: TERMP_01872
Entry
TERMP_01872       CDS       T01377                                 
Name
(GenBank) archaeal DNA polymerase II large subunit
  KO
K02322  DNA polymerase II large subunit [EC:2.7.7.7]
Organism
tba  Thermococcus barophilus
Pathway
tba03030  DNA replication
Brite
KEGG Orthology (KO) [BR:tba00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TERMP_01872
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tba03032]
    TERMP_01872
Enzymes [BR:tba01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     TERMP_01872
DNA replication proteins [BR:tba03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    D-family DNA polymerases
     TERMP_01872
SSDB
Motif
Pfam: PolC_DP2 LAGLIDADG_3 Intein_splicing zf-ribbon_3 DZR DZR_2 Lar_restr_allev DUF4428
Other DBs
NCBI-ProteinID: ADT84847
UniProt: F0LKL3
Position
complement(1663148..1668418)
AA seq 1756 aa
MSELYSEEMKAYFEMLQKEIDKAYEIAKKARAQGKDPVRDVEIPQATDMAGRVESLVGPK
GVAERIRELAREYGKELAALKIVDEIIEGKFGKFDSKEKLAEQAVRTALAILTEGIVSAP
IEGIAQVKIKKNPDGTEYLALYYAGPIRSSGGTAQALSVLVGDYVRKKLGLDKFKPTEKH
IERMVEEVDLYHRAVTRLQYHPSADEVRLAMQNIPVEITGEATDDVEVSHRDVPGVETNQ
LRGGAILVLAEGVLQKAKKLVKYIDKMGIEGWGWLKEFVEAKEKGKTEEGTEEKAEKSKG
EKAEVQTSVKVKKGFYYELYERFRANIAPNNKYTKEIIGGRPLFAEPSENGGFRLRYGRS
RVSGFATWSINPAVMILVDEFLAVGTQMKTERPGKGCIVTPATTAEGPIVKLKDGSVIRV
DDYYLALKIRDQVEEILYLGDAIIAFGDFVENNQTLLPANYVEEWWIQEFVKAVEDIYEV
PLKPFAENDEEAVEEAADYLDLKPEFLAELLKDPLKIRPKVEEAIHLSKVLDIPLHPYYT
LYWNTLKPEEVAELQSLLVNAEIEWDKYLGTKYAKKIVINLEVLGRKGKRYLELLGLPHR
VEDKSVIIEYPWSAALLTPLANLEKKFEPKEFHTTIDIVNEVSEVKLRDRGISWIGARMG
RPEKAKERKMKPPVHVLFPIGLAGGSSRDIYKAAQEGKLAEVEIAQFKCTNCSHIDIFPT
CPVCGAEAKLLYRCPKCNYSSTEETICPKCGIEMRAYVKKTINPSHLVKQAMQNVRVNTL
DKLKGVMGMTSAHKVPEPLEKGILRAKNDVYVFKDGTIRFDATDAPITHFKPREIGVSVE
KLRELGYTHDFEGKPLVSEDQIVELKVQDVILSKEAGKYLVRVAKFIDDLLERFYGLPRF
YNVEKMEDLIGHLVIGLAPHTSAGIIGRIIGFVDALVGYAHPYYHAAKRRNCFPGDTRIL
VQLNGMPQRITLRELYELFEEESYENMAYVRKKPKVDIKVYSFDEESGKVVLTDIEDVIK
LPSTDHLIRFELELGRSFETTVDHPVLVYENGRFIKKRAFEVKEGDLILVPKIEFPEEDI
DSIDLLEEFSKDEFKELRERIMVRGIAEWLMKIGAEVNPDYIRRNSIPLAVLLEVLKEKG
LSIKDVPDCYIGFKPDHVKIRRFVPIGPLLRLIGYYLAEGYARESDSVYQISFSNGDEEV
REDIKRALRKAFGDGFGIYERGEKITVGSRVIYLLFTRVLKIGKGAKDKRVPAFVFKLPK
EKVRHLLQAYFEGDGTAIKSRPMIVVYSVNKPLLEDIDTLMIAKFNLYASWGVDKNANSR
PGNIVQRYHEHRGRRVPVSTVYRLDYYGIQAKRFFEEIDFISERKNSVVNAWTNHKFQPY
RRANEMGILVRVRRVEYVKPPEEWVYSLSVAKYHTVIVSDNITTSNCDGDEDAVMLLLDA
LLNFSRFYLPEKRGGKMDAPLVVTTRLDPREVDSEVHNMDIARYYPLEFYEATYELKSPK
ELVGVVERVEDRLGKPEMYEGLKFTHDTDDIALGPKLSKYKQLGDMEEKVRQQLALAEKI
RAVNEHHVAETIINSHLIPDLRGNLRSFTRQEFRCVKCNTKYRRPPLSGKCPKCGGKIVL
TVSKGAIEKYLPTAKLLVTNYDVLTYTRQRICLTEKDIKSLFANVFPETQRTLLALNTND
ICDRMIAERTGKIVTKNGYLDEFHGNGRKVQKKVEAPKKVEKRELTKMQAHKPEKSEKHK
PKKKKKVVSLDEFFGA
NT seq 5271 nt   +upstreamnt  +downstreamnt
atgagcgagctttacagcgaagagatgaaagcgtattttgaaatgttgcagaaagaaatt
gataaggcttatgagatagctaagaaggcgagagcccagggaaaagatcccgtcagggat
gttgaaattccccaagcaacggacatggcaggtagagtagaaagcttggttggtccaaaa
ggtgttgccgagaggattagagagcttgcgagagagtatggtaaagagcttgccgccctt
aaaattgttgatgagatcattgaaggtaaattcggaaagtttgacagcaaagaaaagctg
gcggagcaggctgttagaactgcactggctattctgacagaaggtatagtttctgctccg
attgaaggtatagctcaggttaagatcaagaagaatccagatgggacggagtatttggcc
ctctattacgctgggccaatcagaagttctggtggaactgctcaggcgttaagtgttctc
gttggtgattacgttaggaaaaaacttggattggataagtttaaacccacagagaagcac
atagagagaatggttgaagaagttgatttgtatcacagagccgttacccgtttgcaatat
cacccttcggcagatgaggtaagattggctatgcagaatattccggttgagataaccggt
gaagcgactgatgacgttgaggtttctcatagagacgttccgggagttgagacaaaccag
ctcagaggtggagcgattctcgttttggcagaaggtgttcttcagaaggcgaagaagctg
gttaaatacattgataaaatgggcattgaaggctggggctggctcaaggaatttgttgag
gcaaaggagaagggcaaaacagaggaagggacagaagagaaagctgaaaaatcaaagggg
gaaaaggctgaggtacaaacctctgtaaaggtcaaaaaaggcttttactatgaactttat
gaaaggttcagagctaacattgctccaaacaacaaatacacaaaggaaattattggtgga
agaccgctatttgcagaaccatcagagaatggtggcttccgtttaagatatggtcgttcg
agggtgagcggatttgcaacctggagcataaatcctgccgtcatgattcttgttgatgaa
ttcttggctgtgggtacacagatgaagactgagaggccgggaaagggctgtatcgttacc
cctgctacaacagccgaaggtccaatcgttaagctcaaggatggctccgtcattagggtt
gatgattactatcttgctttaaagattagggatcaagtcgaggaaatactctacttgggc
gatgcaattatagcctttggagattttgtagagaacaatcaaactttacttccagctaat
tatgttgaagaatggtggattcaggagtttgtgaaagcagttgaagatatatatgaagtt
cccctcaagccctttgctgaaaatgatgaagaggcagttgaagaagccgctgattatctc
gatttaaaaccagaattcttggcagagcttctgaaagaccctctgaaaattagacctaaa
gttgaggaggcaatacacctctcaaaggttcttgacattcctctccatccatactacact
ctctactggaacaccctcaagccagaagaagttgctgaacttcaaagccttcttgtcaat
gctgagattgagtgggataagtaccttggaacaaaatatgccaagaagattgtaataaat
cttgaagtgcttggaaggaaaggaaagcgctaccttgaactgctcggcctgccccacaga
gttgaagataaaagcgtaatcattgagtatccttggagtgctgctctgcttactccattg
gctaacttggagaagaaatttgagccgaaggaattccacactaccatagacatagtcaat
gaggtcagtgaagtaaagctcagggacagggggataagctggattggtgcgagaatggga
agacctgaaaaggctaaagagagaaagatgaagccaccggttcacgtcctcttcccgatt
ggtttggctgggggtagctcaagagacatctacaaggcggcacaggaaggaaaattagcc
gaagttgagattgctcagttcaagtgcaccaactgcagtcatattgatattttcccaacc
tgtccagtgtgtggagctgaggctaaactgctgtacagatgtccaaaatgtaactatagc
tcaaccgaggaaacgatctgtccaaagtgcggcattgagatgagggcttatgtcaaaaag
accataaatccgtctcatcttgtaaaacaggcaatgcagaatgtgagagtgaatactctt
gataagcttaagggcgtcatgggtatgacctcagcacataaggtgccagagcccctggag
aagggaattttaagggctaagaatgacgtttatgtgttcaaggatggcacgattcgtttt
gatgcaacagatgctccgataactcacttcaagccgagagagattggagtcagcgttgag
aagttaagagagctcggatatactcatgactttgaaggaaagcccttggtgagtgaggac
caaatagttgagctcaaagttcaggatgttatcctttctaaagaggctggaaagtatctt
gtgagggttgcaaagttcatagacgatttgcttgagagattctatggattgccaaggttc
tacaatgtcgagaagatggaagatttgattggccatcttgtcataggcttagctccgcac
acatccgctggaatcattggaaggattatagggtttgttgatgctcttgtgggctatgcc
catccgtattatcatgctgcaaagaggaggaactgcttccctggtgataccagaatactt
gttcagctcaacggcatgcctcagagaataacgctcagagagctgtatgagctatttgaa
gaagaaagctatgaaaacatggcatatgtaagaaagaagccaaaagtagatatcaaagtt
tattcctttgacgaagagagtggaaaagtagttttaactgacattgaagatgtgattaaa
ctgccttcgactgatcacctcataagatttgaacttgagctgggcaggagttttgaaacg
acggttgatcatccagtgcttgtctacgaaaatgggaggtttattaagaagagagctttt
gaagtaaaggaaggtgacttaattcttgtgcctaagattgagtttccagaagaggatatt
gacagcatagatttgctcgaggaattctcaaaagacgagtttaaggagcttcgtgagcgg
ataatggttcgcggaatagctgaatggctaatgaaaatcggtgctgaagttaatcctgac
tacataaggagaaattccatacccttggcagttctccttgaggttttgaaagaaaagggt
ctctcgattaaggatgtgcctgactgttacattggctttaagcccgatcacgtaaaaatc
aggcgcttcgttccaatagggcctctccttaggcttataggctactatttagcagaaggt
tacgcaagagagagtgacagtgtctatcagataagcttctcaaacggagatgaagaggtt
agagaggacattaaacgtgcccttaggaaagccttcggagatggctttggaatctacgag
cgtggggagaaaataactgttggctcaagggttatctatctgcttttcaccagagttcta
aagattggaaaaggagctaaggataaaagggtcccggcatttgtcttcaagcttccaaag
gagaaggttaggcacttgcttcaagcttactttgaaggtgatggcactgcgatcaaaagc
agacctatgattgttgtttatagcgtcaacaagcctctccttgaggatatagacaccttg
atgatagcaaaattcaatctctacgcaagttggggggttgacaaaaacgcaaactcccga
ccaggcaatatcgtccaaagataccatgagcacagaggcagaagggtccctgtttccact
gtttacagactcgattattatggaattcaagcaaagagattctttgaggagattgacttc
attagtgagcgtaagaattctgtggttaatgcatggacgaatcacaagttccaaccatat
cgtagggctaatgagatgggcattcttgttagagtccgccgtgtggagtacgttaaaccc
cctgaagagtgggtgtattcattgagcgtagccaagtatcatacggtcattgttagtgat
aatattactacttcaaattgtgacggagatgaggacgctgtcatgcttctacttgatgca
ctattgaacttctctcgcttttatttgccagaaaaacgtggaggcaaaatggatgctcct
ctcgtcgtaactacgaggcttgatccaagagaagttgacagcgaagtccacaatatggac
attgcccgttattatccgcttgaattctatgaagcaacgtatgaacttaaatctccgaaa
gaacttgttggagttgttgaaagggttgaagacagattaggaaagccggagatgtatgaa
gggttaaagttcacccatgacaccgatgacattgctcttggaccaaagctgagcaaatac
aagcagctgggtgatatggaggaaaaagttaggcagcagttggctttagctgaaaaaatc
agagcagttaacgagcatcatgtggctgagacgataattaactctcatctaattccagat
ttgagaggcaacttaaggagcttcacaaggcaggagtttagatgtgttaagtgtaacacc
aaatataggagacctccattaagcgggaagtgtccaaaatgtggtggaaagatagtactg
acggtcagcaagggggcaattgaaaagtaccttcccacagcaaaattgttagttactaat
tacgatgtccttacatacacgcggcaaaggatatgcttaacggaaaaggacattaagagt
ctatttgcaaatgtcttccctgaaacccagagaactctgttagcattgaacacgaatgac
atctgcgacagaatgattgctgagagaactggaaaaattgttaccaagaatggttatctt
gatgagttccatggaaatgggaggaaagtccagaagaaagtagaagctcccaaaaaagtt
gagaaaagagagcttactaaaatgcaggctcataaacccgaaaagtccgagaagcataaa
cccaagaagaaaaagaaggtcgtcagcttagatgagttctttggagcttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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