KEGG   Thiobacillus denitrificans: Tbd_0002
Entry
Tbd_0002          CDS       T00275                                 
Name
(GenBank) DNA polymerase III, beta chain
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
tbd  Thiobacillus denitrificans
Pathway
tbd03030  DNA replication
tbd03430  Mismatch repair
tbd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tbd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Tbd_0002
   03430 Mismatch repair
    Tbd_0002
   03440 Homologous recombination
    Tbd_0002
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tbd03032]
    Tbd_0002
   03400 DNA repair and recombination proteins [BR:tbd03400]
    Tbd_0002
Enzymes [BR:tbd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Tbd_0002
DNA replication proteins [BR:tbd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Tbd_0002
DNA repair and recombination proteins [BR:tbd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Tbd_0002
SSDB
Motif
Pfam: DNA_pol3_beta_2 DNA_pol3_beta DNA_pol3_beta_3
Other DBs
NCBI-ProteinID: AAZ95955
UniProt: Q3SMT5
Position
1689..2792
AA seq 367 aa
MLLIQSERNALLSALSAVVGVVERRHTLPILSNLLLEKKAGTLTLLATDLELQVSTRLEA
QGGDDFAITIAARKLFDIVRALPDSASVKLDTKDSQVVVSAGKSRFTLQTLPAADFPRVE
TGAGVGTVVRLPQKTLKRLLQLVQFAMASQDIRYYLNGMLLVLDGQQLRVVATDGHRLSY
AETTLDAPTDAQEVIIPRKTVIELSKLLSDSDEPVELRIGSNQVTIMLPGTELVTKVVDG
KFPDYQRVIPANQPRHLKANRQTVVQALQRAAILSNEKFRGVRLVMSDNTLGIVCNNNEQ
EEAADEIEVSYNGDPLDVGFNVTYLLDGLGAVNTDEITLSLGDANSSMLLTSEGEPGFKY
VVMPMRI
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgttattaatacaaagcgaacgcaatgccttgttgagcgccctctcggcagtcgtcggg
gtcgtcgagagaaggcacaccctgccgatcctgtccaatcttctgctcgagaagaaagcc
ggcacgctgaccctgctcgcgaccgacctcgagctccaggtcagcacccggctcgaggcc
cagggcggtgacgacttcgcgatcacgatcgcggcgcgcaagctcttcgacatcgtccgc
gccctgcccgattcggcgtcggtcaagctcgataccaaggacagccaggtcgtcgtcagc
gcgggcaagtcgcgcttcacgctgcagacgctgcctgcggccgacttcccgcgcgtcgag
accggcgccggggtcggcacggtcgtccgcctcccgcagaaaaccctgaagcgcctgctc
cagctcgtgcagttcgcgatggcgagccaggacatccgctactacctgaacggcatgctg
ctcgtcctcgacggccagcagctgcgcgtcgtcgcgaccgacggccaccgcctgagctac
gccgagaccacgctcgacgcgcccaccgacgcgcaggaagtcatcatcccgcgcaagacc
gtcatcgaattgtccaagctcctgagcgacagcgacgagccggtcgaactgcgcatcggc
agcaaccaggtgacgatcatgctgcccggaaccgagctcgtgaccaaggtcgtcgacggc
aaattccccgactaccagcgcgtcatcccggcaaatcagccgcgccacctcaaggccaac
cggcagaccgtcgtgcaggcgctgcagcgcgcggcgatcctgtcgaacgagaaattccgc
ggcgtgcgcctggtgatgagcgacaacacgctcggcatcgtctgcaacaacaacgagcag
gaagaagcggccgacgaaatcgaggtcagctacaacggcgatccgctcgacgtcggcttc
aacgtcacctacctgctcgacggcctcggtgccgtcaacaccgacgagatcacgctgtcg
ctcggcgacgccaacagcagcatgctgctcacgagcgaaggggagccggggttcaaatac
gtcgtgatgccgatgcgcatctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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