KEGG   Treponema brennaborense: Trebr_1145
Entry
Trebr_1145        CDS       T01489                                 
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG
  KO
K02405  RNA polymerase sigma factor FliA
Organism
tbe  Treponema brennaborense
Pathway
tbe02020  Two-component system
tbe02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:tbe00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Trebr_1145
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    Trebr_1145
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tbe03021]
    Trebr_1145
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:tbe02035]
    Trebr_1145
Transcription machinery [BR:tbe03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Trebr_1145
Bacterial motility proteins [BR:tbe02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    Trebr_1145
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 UPF0122 HTH_23 MarR_2 HTH_38
Other DBs
NCBI-ProteinID: AEE16573
UniProt: F4LKX6
Position
1363898..1364686
AA seq 262 aa
MAASIFEEKTEDELWLEYKKTKSPALRDAFIRQYMPLVKYVAGKVATGMPGSVEFDDLVG
FGQFGLLDAINKYDPDKNVKFKTYAVTRIRGSIFDELRQLDWVPRSVRQKAREIEDAIVA
LESRLGRPASDAEVAGSMGISEAEFQQTVMRVSGTSVLSLNDVWYSGDDSDHVSIGDSIE
SPASLNPDVIVEREEIRRVIAEAITELPEKEKMVLVLYYHEDLTFKEIGQVLNVSESRIS
QLHTKANMRLRSKLTNIRKGIM
NT seq 789 nt   +upstreamnt  +downstreamnt
atggctgcttcgatttttgaagaaaagacagaagacgagctttggctcgaatacaaaaaa
acaaaatcgcctgcattacgggacgcgtttatccgtcagtatatgccgcttgtaaaatat
gttgccggtaaagttgctacgggcatgcccggcagtgttgaattcgacgatctggtcggc
ttcggccagttcggtctgcttgatgcaatcaataaatatgatcccgataaaaacgtaaag
ttcaaaacgtacgcggtaacccgtattcgcggttcaatcttcgacgaactgcggcaattg
gattgggtaccgcgttccgtccggcagaaagcgcgtgaaatagaagacgcgattgtcgct
ttggaatcgcgtctcggccgtccggcttccgatgcggaagtcgcgggttccatgggaatc
agtgaagccgaattccagcagacggtgatgcgcgtttctggaacgagcgtactttcgctg
aacgacgtatggtattccggggacgattccgatcacgtttcgatcggcgacagtatcgag
tctccggcaagtttgaatccggacgttatcgtcgagcgggaagagatccgccgggttatt
gcggaagcgattacggaactgcccgaaaaagaaaaaatggtactcgttttatattatcat
gaagatctgacgttcaaggaaatcggtcaggtactcaacgtcagcgagtcgcgtatttca
cagctgcatacgaaagcgaatatgcggctgcgttcaaaattgaccaatatcagaaaaggc
atcatgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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