KEGG   Treponema brennaborense: Trebr_1388
Entry
Trebr_1388        CDS       T01489                                 
Name
(GenBank) poly(A) polymerase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
tbe  Treponema brennaborense
Pathway
tbe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tbe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Trebr_1388
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tbe03019]
    Trebr_1388
Enzymes [BR:tbe01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     Trebr_1388
Messenger RNA biogenesis [BR:tbe03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     Trebr_1388
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd DUF2204
Other DBs
NCBI-ProteinID: AEE16812
UniProt: F4LN47
Position
complement(1639663..1640943)
AA seq 426 aa
MLIRYTADAKGKPVKKAVIYTKEEHSIPREKIDADALRVISMLREYGFDAYVVGGAVRDL
LVDKDPKDFDIVTDAPPPRIKKIFRNSRIIGRRFRLVHVFFGPKIFEVSTFRSITDGSVG
NSFGSMDEDVQRRDFTLNALYYDPVREQIVDYVGGVKDIRKGVIRPVIPIERIFEEDPVR
MLRAVKYAATTGCKLPGYLKRKIRKSAHLLSPVSPSRLTEELMKIINSGHAYDIVKFSLE
VDLYMYLQPAATAMMYADPKYEHDYFVHLKELDALHVVDPSARLGQKLAYLIYDFTAGLT
DWTEEAESRSAAGELYMKTWAQCRNFVLPMNPQRTELEFAIRTVLKKLGISVHIPKKVFG
SGSTRTLNESGTGKNGNAAGSAKRRRKRHAPAKDTAAVPSKDAAAAPAVFSRPCETVSES
PKSAVL
NT seq 1281 nt   +upstreamnt  +downstreamnt
gtgttaattcgatatacagctgatgctaaaggcaaacccgtcaaaaaggcggttatttat
accaaagaagaacattcgattccccgcgaaaaaatagacgcagacgcactgcgcgtcatt
tccatgttgcgcgaatacggatttgacgcgtacgtggtgggcggcgccgtccgcgattta
ctggtcgataaagacccgaaggatttcgacatcgtaaccgacgcaccgccgccgcgaatc
aaaaagattttccgtaattcgcggattatcggacgccggtttcggctggtgcacgtgttt
ttcggccccaaaatttttgaagtcagcacgttccgttccataacggacggttcggtcgga
aacagcttcggttcgatggatgaagacgtgcagcggcgcgactttacgctgaacgctttg
tattacgatccggtgcgggagcagatcgtcgattacgtcggcggtgtaaaggatatcaga
aaaggcgtcattcgtccggtcattcctatcgagcgcatttttgaagaagatccggtgcgt
atgctgcgcgcggtaaaatatgcggcgacgaccggctgcaaactgcccggttatctgaaa
cggaaaatccgtaaatcggctcatttgctgtcgccggtgtctccgtcgcggctcacggaa
gagctgatgaaaattatcaacagcggtcacgcctatgatatcgtcaagttttcgcttgaa
gtcgacttgtacatgtacctgcagccggcggctacggccatgatgtacgccgatccgaag
tacgagcacgactatttcgtccatttaaaagaactcgacgcgctgcacgtggtggatcct
tccgcgcggctcggtcaaaaacttgcgtatctgatttatgattttacggccggattgacc
gattggacggaagaagcggaatcgcgttccgccgccggcgaactgtatatgaaaacctgg
gcgcagtgccggaatttcgtgctgccgatgaatccgcagcggacggaacttgagtttgcg
attcgcaccgtgctgaaaaaactcggtatttccgtacatattcccaaaaaagtattcggt
tccggctcgactcgcacgctgaatgagtcgggaaccggcaaaaacggaaacgctgcaggt
tctgcaaaacgacgcagaaaaagacacgcgccggcgaaggataccgccgccgtgccgtcg
aaagacgccgcagctgcaccggccgttttcagccgcccctgcgaaaccgtttccgaatcg
cccaaaagcgccgttctgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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