KEGG   Thiolapillus brandeum: TBH_C0858
Entry
TBH_C0858         CDS       T03600                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tbn  Thiolapillus brandeum
Pathway
tbn03410  Base excision repair
tbn03430  Mismatch repair
tbn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tbn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    TBH_C0858
   03430 Mismatch repair
    TBH_C0858
   03440 Homologous recombination
    TBH_C0858
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tbn03400]
    TBH_C0858
DNA repair and recombination proteins [BR:tbn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     TBH_C0858
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     TBH_C0858
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      TBH_C0858
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB Glyco_transf_4 DUF5122
Other DBs
NCBI-ProteinID: BAO43792
UniProt: A0A7U6JHH8
Position
939058..940806
AA seq 582 aa
MPTSVSSRAMSKTIVTRDSRGAGDRLPDSLHPVLRRIYACRGVENAEELNLGLDALLPVE
LMTGADEAARIIAGQMENDGHILVIGDFDCDGATSTALSVLALRAMGARQVDYLVPNRFE
YGYGLTPEIVELAARDKPDLIITVDNGVSSVDGVAAANALGIPVIVTDHHLPGEQLPAAA
AMVNPNLPDSRFPAKSTAGVGVIFYVLLALRALLRDRQWFRGRAEPNMADYLDLLALGTV
ADVVPLEHNNRILVRQGLARIRAGRCRPGISALLEVAGRSQHRVQASDLGFAVGPRLNAA
GRLDDMSVGIECLLADDPLEARQLAVQLDTLNRDRRVIEDDMRQQAEEMLAGLKMKEMDL
PPGLCLYDESWHQGVIGILASRIKERHHRPVIAFAPGEGGEIKGSARSIPGVHIRDVLDE
VNAKHPGLVPRFGGHAMAAGLTLASGKLDAFRAAFNEVLQARLEGRDLEPVIESDGEIAP
QDMHLEMAGLLADGGPWGQGFPEPLFHGEFEVVQQRLLKDRHWKLVVQPAGGDQIVDAIG
FNLADDMPGPLPERVLMAYQLDINEFRGNVNLQLRIAHMEAA
NT seq 1749 nt   +upstreamnt  +downstreamnt
atgccaacaagtgtatcatcccgggccatgtcaaagaccattgtgacccgagattcccgg
ggcgccggtgaccggcttcccgacagcctgcacccggtgctcaggcgtatctacgcctgt
cgtggcgtggagaatgctgaagaactgaatctcggcctggatgccctgttgcccgtggag
ctgatgaccggtgccgatgaagctgcccggatcatcgccgggcagatggagaacgatgga
cacatcctggtgatcggcgatttcgattgtgatggcgccaccagtaccgcgctttccgtg
ttggcgctgcgggccatgggcgcgcgccaggtggactatctggtgcccaaccgctttgaa
tacggctacggcctgacgccggagatcgtcgagctggcggcccgggacaagcccgatctg
atcatcaccgtggacaatggcgtgtccagtgtggatggtgtggcggcagccaatgccctg
ggtatcccggttatcgtaacggatcatcaccttccgggagaacagttgcccgcagcagcg
gccatggtcaatccgaatctcccggacagccgtttcccggccaagtccactgcgggggtg
ggggtgattttttatgtgctgctggccttgcgtgccctgctgcgtgaccgtcaatggttc
cgtggccgggcagaacccaatatggcggactatctggatctcctggctctgggcaccgtg
gcggacgtggtgcctttggaacacaacaaccgcattctggtgcgtcagggcttggcgcgg
attcgcgccgggcgttgccgccccggcatatccgccctgctggaagtggccgggcgcagc
cagcaccgggtccaggcatcggatctcgggtttgccgtggggccgcgcctgaatgccgcc
ggacgtctggatgatatgtccgttggtatcgaatgcctgctggcggatgatcccctggaa
gcccggcagctggcggtgcaactggataccctgaatcgcgaccggcgcgtcatcgaggat
gacatgcgccagcaggcggaggaaatgctggccgggctgaagatgaaagaaatggatctt
cccccgggtctgtgtctgtacgatgaaagctggcaccagggcgtgattggtatccttgcg
tcgcgcatcaaggagcgccatcaccggccggtgatcgcgtttgcaccaggtgaaggggga
gagatcaaaggctcggcgcgttccattcccggcgtgcacattcgagatgtgctggatgag
gtcaatgccaaacaccccggcctggtgcccaggttcggcggccatgccatggcggcaggg
ctgaccctggcatccggcaaactggatgccttcagagcggctttcaatgaagtgcttcag
gcccggctggagggcagggatcttgaacctgtgatcgaatccgatggagagatcgccccc
caggacatgcacctggaaatggcgggtcttctggccgatggtggcccctggggccagggg
tttccggaacccctgtttcatggcgagttcgaggtggtgcagcagcgcctgctcaaggac
cggcattggaaactggtggtgcagcctgccggcggtgaccagatcgttgatgccatcggc
ttcaacctggccgatgacatgcccggccccctgccggagcgggtgctcatggcctaccag
ctggatatcaatgaatttcgcggcaatgtgaatctgcagttgcgcattgcccatatggag
gcggcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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