KEGG   Trypanosoma brucei brucei: Tb09.244.2820
Entry
Tb09.244.2820     CDS       T01013                                 
Name
(RefSeq) DNA polymerase epsilon subunit B, putative
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
tbr  Trypanosoma brucei brucei
Pathway
tbr03030  DNA replication
tbr03410  Base excision repair
tbr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tbr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Tb09.244.2820
   03410 Base excision repair
    Tb09.244.2820
   03420 Nucleotide excision repair
    Tb09.244.2820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tbr03032]
    Tb09.244.2820
   03400 DNA repair and recombination proteins [BR:tbr03400]
    Tb09.244.2820
Enzymes [BR:tbr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Tb09.244.2820
DNA replication proteins [BR:tbr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    Tb09.244.2820
DNA repair and recombination proteins [BR:tbr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      Tb09.244.2820
SSDB
Motif
Pfam: DNA_pol_E_B
Other DBs
NCBI-GeneID: 3661191
NCBI-ProteinID: XP_827653
UniProt: Q38CZ7
Position
9:2293381..2294988
AA seq 535 aa
MDYRNDIQQLARAHQFRLHPLALKGLSDYLATLNGNIDAQRNALRDIFALLHRACGLERF
VDGEKVKSVVSLHSSKVQGAIDGVVPTVDVLSLDDTPYAYIDEWSGEVRVQSTRQHGDRF
TVLNQRYLFARKRCLRSGLFSRDSSKQPIDQGLPSLVPSIALEGIDPSDTVAVLGMLVKH
SSATYLEDIYGRVKLIMRGCVHPPVGVVGEGFFVVVKGQWVGGLFVVASVDLPPAERRED
TLRVVGSDFDLFGRRPDDVVAAFRREKTSLGSVVIVMSQIHLDQRSTVDSLISFFREMQN
RSEAELTDTTLVMVGEFCSSPIHYDDVSHLPEPFEGCDRYRSLMNILATVITVHAPSVAQ
LTQVVIVPGCGDITGLLGVLPQPPIVSTFGKVLQARLKKVVLAPNPCRLRFFTHEMIVVR
RDFSRSLREKERTFEWSRHEASTPVISFESIAKTILDEAHLAPGVTEGILWKADKALCLP
VLPHLLVMCDSTEQWECSYKGVRIVNPGPFSLGKTFLWYTPADGECSLSSVDDQV
NT seq 1608 nt   +upstreamnt  +downstreamnt
atggattaccgtaatgatatccaacagttagctcgggcgcatcagtttcgccttcacccc
ctcgctctaaagggactgtctgactacctcgccactctcaacggcaatatcgacgcgcaa
cgtaacgcgcttcgtgacatttttgcgcttcttcatagggcttgcggcttggaaagattt
gtggacggtgaaaaagtgaaatctgttgtatctttgcattcatctaaggtacagggggcg
atcgacggtgttgtgccgactgttgatgtgctatcgctggatgacacgccctatgcgtat
attgatgagtggagcggcgaggtaagagtacagtcaacgcgacaacacggtgatcggttc
acagtacttaaccaacgctacctttttgccagaaaaaggtgcttaaggagtggcttgttc
tcccgggattctagcaagcaaccaatagaccaagggctcccctccctcgtcccctcaatt
gccctcgaagggatcgacccctctgacaccgtagccgttctgggaatgctcgtcaaacat
tccagcgcaacatatttggaagacatctacggtcgcgtcaagcttatcatgcgtgggtgt
gtgcaccctcctgttggcgtcgtgggagaaggatttttcgttgtggtgaaggggcagtgg
gttggtggattgtttgttgtggctagcgtagacctcccgcccgcagagaggcgcgaagac
acactgagggtcgttggctctgattttgatcttttcggtcgacgccccgatgacgttgtg
gcggcatttaggcgggagaaaacttcgttgggctctgtggtaatcgtgatgtcgcagatt
caccttgaccagcgctcaaccgtcgatagtctcataagtttcttcagagaaatgcaaaac
cggtcggaagctgagctgacagatactacactggttatggtcggcgagttttgctccagc
ccgattcactacgatgacgtttcacatcttcccgaacccttcgaaggctgtgatcgctac
agatcacttatgaacattctcgcgactgtaattactgttcatgcgccgagcgttgcgcaa
ctcacacaggtggttattgttcctgggtgtggcgacattacgggtcttcttggcgtttta
ccacagccacctattgtcagcacatttggcaaagttttgcaggcgcgtttgaagaaggtt
gtcttagcccctaacccttgccggctgcgcttcttcacgcacgaaatgatagtagttcgt
cgggatttctctcggtcgctgcgggagaaggagcgcacattcgagtggtcccggcatgag
gcatccacgcctgttatttcctttgaaagtattgcaaagactatcctggacgaggcgcac
ttggcgccgggggtgacggaggggattttgtggaaagcagataaggcactctgcctacca
gtgcttccacatcttctcgttatgtgcgacagcacagaacagtgggagtgttcctacaag
ggggttcgtatcgtcaacccagggccattctcgctcgggaagacatttctgtggtatacg
ccagctgatggggagtgtagcctgagcagtgtcgacgaccaagtatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system