KEGG   Trypanosoma brucei brucei: Tb927.3.5500
Entry
Tb927.3.5500      CDS       T01013                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 3, putative
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
tbr  Trypanosoma brucei brucei
Pathway
tbr03020  RNA polymerase
tbr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Tb927.3.5500
  09124 Replication and repair
   03420 Nucleotide excision repair
    Tb927.3.5500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tbr03021]
    Tb927.3.5500
   03400 DNA repair and recombination proteins [BR:tbr03400]
    Tb927.3.5500
Transcription machinery [BR:tbr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     Tb927.3.5500
DNA repair and recombination proteins [BR:tbr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      Tb927.3.5500
SSDB
Motif
Pfam: RNA_pol_L RNA_pol_A_bac
Other DBs
NCBI-GeneID: 3656493
NCBI-ProteinID: XP_844140
UniProt: Q580S5
Position
3:1538252..1539265
AA seq 337 aa
MKVTIVDCKRHEHSAGETLVFKLNEVDNSFANGLRRVLLAEVPVLGVESVTIIQNTSVLP
DEMIAHRIGLVPLYSKRAKQMQFFHDCLCGGTGCIECQITGELKVRCPSNQHSLQVFADS
LKIDDEGVYPVSSEERGVWLLTLGRSQEINLRVLIRKSIAKTHAKFMPVSTVSMRYEPEV
ILNKDVISSLDPEQLRQWMRSCVHRPHSIAESNGEGHTGHIDVNKLCEECLLKEPSVVSF
TEPLVFARPKKDARGHYNFTFTVETTGVLPVLQLIRDAVDVLRRKLQRVHECLTERVVPG
DLVETRPIGDAPTAPVVVNEDIMDTKGAEDDLKFVMN
NT seq 1014 nt   +upstreamnt  +downstreamnt
atgaaggtgacgattgtagactgcaagagacatgagcactcagctggggaaacgttggtg
tttaaactaaacgaagtcgacaattcatttgccaacggactccgacgcgtgcttctggca
gaggttccagtactcggagtggaatctgtgaccataattcaaaacacatcggtccttcct
gatgaaatgattgcgcaccgaatcggccttgtgcccctttactctaagagggcaaaacag
atgcagttttttcacgactgcctgtgcggtgggactggttgtattgaatgtcaaataaca
ggagagttgaaggttcgttgcccttcaaaccaacacagtttgcaagttttcgcagattct
cttaaaattgacgacgaaggggtttaccccgtgagttcagaggaacgtggtgtttggttg
ttaacgttgggtcgctcgcaggaaattaacctccgcgtgctaatccgaaaaagtattgcc
aaaacacacgccaagtttatgccagtttctacggtttcgatgcgctacgaaccggaggtg
atattgaataaagatgtgatttctagtcttgaccctgaacaacttcggcagtggatgcgg
tcttgtgtccatcgtccacattccattgctgagagtaatggagaagggcacacgggccac
attgacgtcaataagttatgcgaggagtgtttgttgaaggaaccgtcagttgtctccttc
actgagccacttgtcttcgcgcgtcccaagaaagatgcacgtgggcattataactttaca
ttcacagtggagactactggcgtccttcctgtacttcagttaataagagatgcggttgat
gtgctgcgtcgtaaactccagcgcgtgcacgaatgtctcactgagagggttgttcccgga
gatttagtggaaacccgacctattggtgatgcaccaactgcacccgttgtggtgaatgaa
gacattatggacaccaaaggcgcggaggacgatctcaagttcgtgatgaattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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