KEGG   Trypanosoma brucei brucei: Tb927.4.3490
Entry
Tb927.4.3490      CDS       T01013                                 
Name
(RefSeq) DNA-directed RNA polymerase subunit, putative
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
tbr  Trypanosoma brucei brucei
Pathway
tbr03020  RNA polymerase
tbr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Tb927.4.3490
  09124 Replication and repair
   03420 Nucleotide excision repair
    Tb927.4.3490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tbr03021]
    Tb927.4.3490
   03400 DNA repair and recombination proteins [BR:tbr03400]
    Tb927.4.3490
Transcription machinery [BR:tbr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     Tb927.4.3490
  RNA polymerase III system
   RNA polymerase III
     Tb927.4.3490
  RNA polymerase I system
   RNA polymerase I
     Tb927.4.3490
DNA repair and recombination proteins [BR:tbr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      Tb927.4.3490
SSDB
Motif
Pfam: RNA_pol_Rpb6 DUF131
Other DBs
NCBI-GeneID: 3656885
NCBI-ProteinID: XP_844499
UniProt: Q585J9
Position
4:complement(903365..903799)
AA seq 144 aa
MSERDEDEVDRLSLSIGDEHESVAQSDDERSDAGAGVVVSGPAPVRGSAKRRDDRDRVTA
PVLTKYERARILGTRALQISMNAPVLVALEGETDPLTIAQKELREGVIPLIIRRVLPDNT
YEDWRICELDVDFDRPVDERYTNI
NT seq 435 nt   +upstreamnt  +downstreamnt
atgtctgagcgtgatgaggatgaagttgatcgactgagtttgagcattggtgatgagcat
gagagcgtggcgcaaagtgacgatgagcgaagtgatgcgggtgcgggtgttgttgtgtct
ggtcctgcacctgtgcgtggttcagcgaaacggcgtgatgacagagatcgcgtgacggct
ccggtgctgacgaaatacgagagggcccgcatccttgggacacgtgcattgcagattagt
atgaatgctcctgtgttagttgcattggagggtgagacggacccgttgactattgcgcag
aaagagctccgtgaaggtgtcattccgctcattattcggcgtgtgcttccagacaatacg
tacgaggactggcggatctgtgagttggatgtggatttcgacaggcctgtggacgagcgc
tacacaaacatctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

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