KEGG   Trypanosoma brucei brucei: Tb927.8.5040
Entry
Tb927.8.5040      CDS       T01013                                 
Name
(RefSeq) hypothetical protein, conserved
  KO
K14568  rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
Organism
tbr  Trypanosoma brucei brucei
Pathway
tbr03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tbr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    Tb927.8.5040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tbr03009]
    Tb927.8.5040
Enzymes [BR:tbr01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.260  rRNA small subunit pseudouridine methyltransferase Nep1
     Tb927.8.5040
Ribosome biogenesis [BR:tbr03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    Tb927.8.5040
SSDB
Motif
Pfam: EMG1
Other DBs
NCBI-GeneID: 3659505
NCBI-ProteinID: XP_847334
UniProt: Q57UH6
Position
8:1489698..1490534
AA seq 278 aa
MDYRQKAARLPRSAEEKSRWRRVIIILEHCPLAVVRGKYGFELLAERHRAHHARYKQDPA
EWRPDVVHQALLHLMDSPLNRAGMLQVFLRTKKGVVIAVDPRLRVPRHMRLFEKMMVSCL
YRMKVRAANGSVSLLRVVKNPVTDHIPANCTLIRVEKDGDAVPDIFAYCATCGTNRHADG
STSENVGTATACSSSAGSDAKEPHFAQKHRDLADAKQFRPFAFIIGGMSKGDVDAPYAPR
AQVKSIRLGDRGMSAAAACSVIIHGFEEEWLREDNEAC
NT seq 837 nt   +upstreamnt  +downstreamnt
atggattaccgacagaaagctgcccggcttccccgttcggcggaggaaaaaagccggtgg
cgccgtgtcattataatccttgagcactgtcctcttgccgttgtgcgtggtaagtacggc
ttcgaactgttggctgagcgacaccgcgcccaccacgcacgttacaagcaggatcccgcg
gaatggcggcccgacgttgtacaccaagcgttgcttcacttgatggattccccactcaat
cgagctggcatgctacaggtgttcctccgtacgaagaagggtgttgtcatagcagtcgac
ccgcgtcttcgcgttccacggcacatgcgtttgtttgagaagatgatggtatcgtgcctg
taccgcatgaaagttcgtgcagcgaacggctcagtatcgcttctgcgcgtggtgaagaac
cccgtgacggaccacattccggcgaactgcacactcatacgtgttgaaaaggacggtgat
gccgtgcctgatatctttgcgtactgtgcaacatgtgggactaataggcatgctgatgga
tcgacaagcgaaaacgttgggacggcgacggcgtgctcctcctctgcaggaagcgatgca
aaggagccgcactttgcccagaagcaccgtgacctggctgatgcaaagcagttcaggcca
tttgcatttattattggtggtatgtcgaaaggtgacgtggacgcgccgtacgccccgcgc
gcccaggtgaagagtatacgtcttggcgaccgaggcatgtcggctgcggccgcttgcagt
gtcatcatacatggttttgaggaagagtggctgcgcgaggataacgaggcgtgttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

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