KEGG   Tenericutes bacterium MZ-XQ: BK011_01505
Entry
BK011_01505       CDS       T05490                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
tbz  Tenericutes bacterium MZ-XQ
Pathway
tbz03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tbz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BK011_01505
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tbz03021]
    BK011_01505
   03400 DNA repair and recombination proteins [BR:tbz03400]
    BK011_01505
Enzymes [BR:tbz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BK011_01505
Transcription machinery [BR:tbz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BK011_01505
DNA repair and recombination proteins [BR:tbz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BK011_01505
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1 Biotin_lipoyl_2 DUF4385 RPOC_hybrid
Other DBs
NCBI-ProteinID: AUD64415
UniProt: A0A2K9APS4
Position
284563..288489
AA seq 1308 aa
MEYRDVKYGKKAKRRNYSKMRYDIDLPDLIEIQTKSFKWFIDEGIKELLEDISPIEGHNG
DLKLYFEEHYLSEPKYGIQESKIRDVNYAKQLSARVKLENAITGEVRENVVLMCEIPFMT
PSGTFVINGAERVVVSQIIRSSGAYFTSELDKKLNQTKYSAQVIPTRGAWIEYELGSKNI
MYAKLDRSKKVPMTTMMRALGFSKKKDIYEVFGKSLYMDATFDKDETKNSDEAIIDLYSK
LRQGEKVPADAAREFVRMRLFERRRYDLAAVGRYKFNKKLDVLSRIEGQYTATDIINPET
GEVIVPKETKITKGIIDVLREHRHVLRKEVIPKEESLQNETPDEILAQRLPDGGDELYTK
ENIINLRTGEVLVAKNTLVNDEVFAVLRRNRQSLDEKVIKYFFGTKDIYEKELERSGVIV
EMIEVTVKDKETERIYPVKVIGNDQREDREHITLSDIVASMSYYLNLYDGLGQIDDIDHL
GNRRLRLIGELLKNQFRIGLARAEKNIKDKMSTTTFADATPSNIINMTPLAGAIKTFFGS
SQLSQFMDQINPLAELTQKRRVSALGTGGLARDRAGVEVRDVHNSHYGRICPIETPEGPS
IGLISSLATYGKVDQYGFIQTPYLKVDRSSGKPVVIQDMHYLTADEEYHEVIASAATTLD
EDGVIVEEKVIGRHRGETSMFDIDEVTYMDVSPKQIVSVATSTIPFLEHDDASRALMGAN
MQRQAVPLLKPDSPIVGTGIEHRAAKDSGAVVVSDVSGFVTYADGKKVMITQKPDEKIVV
GNNVIYDPTVEFNYQSAKTLKDYGMGETKTFELINFFRSNQDTNILQRPLVKEGEYVEKG
DILADGQSTDNGELALGRNVTVAFMTWEGYNYEDAVIMSEDLVKNDVYTSIHIDEYEIET
RELKTGSGREEITREVPNAGYEALKNLDERGIVIPGSEVKEGDILVGKITPKGVFEPSPS
EKLIHAVIGEKSREYRDSSLRVPHGGGGTVVSIQYFSKKNGDVLPSGVNESITVYVAKKR
KISEGDKMAGRHGNKGVISRILPREDMPYMADGTPIDIMLNPLGVPSRMNIGQILEIHLG
IAAKNLGIKIATPVFDGLNDHDLKSIMKEARDKAYDSIKPSKPIEEMDELEKYNYELDKK
MLAEFGEDGKVTLYDGRTGEPFENRVSVGVMYMIKLSHMVDDKLHARSVGPYTLVTQQPM
GGKAQNGGQRFGEMEVWALYAYGAAHTLQEMLTVKSDDMIGRNKVYSSITHDKPIPQASI
PESFRVLTRELQALGLYVELIDANTGENEATKSLVDHTKTTFTKGGYR
NT seq 3927 nt   +upstreamnt  +downstreamnt
atggaatatcgtgacgtcaaatatggtaaaaaagcaaagcgcagaaattattcaaaaatg
cgttatgacattgatttaccagacctgatcgaaatacaaaccaaatcatttaagtggttt
atcgatgagggcattaaagaactgttagaagatatttcgcccattgaaggacataatggc
gatttaaaactatactttgaggaacattatttaagtgaaccaaaatatggtattcaagaa
tcaaaaattagagatgtcaattatgcgaaacaactctctgctcgtgtaaaattagaaaat
gcaatcactggagaagtgcgtgaaaacgtcgttttaatgtgtgaaattccatttatgacc
ccatcagggacttttgtcattaatggtgctgaacgcgttgtcgtttcacaaattattcgt
tcatctggtgcttattttacgagtgaactcgataaaaaattaaatcaaaccaaatattca
gctcaagttatcccaacgcgtggtgcttggattgaatacgaacttggttcaaaaaacatt
atgtacgctaagttagaccgttcaaagaaagttccaatgacaacaatgatgcgtgcttta
ggtttctctaagaaaaaagatatttatgaagtgtttggaaaatcactttacatggatgca
acttttgataaagatgaaacaaaaaatagcgatgaagcaatcatcgacttatattctaaa
ttaagacaaggcgaaaaagttcctgcagatgctgctagagaatttgttcgtatgcgtctt
tttgaacgtcgccgctatgatttagctgcagttggacgttataaatttaacaaaaaatta
gacgttttatcaagaattgaaggacaatacactgcaacagatatcattaatcctgaaact
ggtgaagtcattgttcctaaagaaacaaaaatcactaaaggcatcattgatgtcttaaga
gaacatcgtcatgtgcttcgcaaggaagttattccaaaagaagaatctttacaaaatgaa
acacctgatgaaatcttagctcaaagacttcctgatggaggcgatgagttatatacaaaa
gaaaatatcattaaccttagaactggtgaagttttagttgctaaaaacacattagttaat
gacgaagtgtttgctgtactaagaagaaaccgtcaatcacttgacgaaaaggttattaag
tatttctttggtacaaaagatatttatgaaaaagaattagaacgtagtggtgttattgtc
gaaatgatcgaagtgactgtaaaagataaagaaacagaacgtatttatccagttaaagtc
attggtaatgatcaaagagaagacagagaacacattacattatcagatatcgttgcttca
atgagttattatttaaacttatatgatggtttaggacaaatagatgatattgaccactta
ggtaaccgtcgtttaagacttattggagaattattaaagaatcaatttagaattggtcta
gcaagagctgaaaagaacattaaagataagatgtctacaacgacatttgctgatgcaacg
ccatctaatatcattaatatgacaccacttgctggcgcaattaagacattctttggtagc
tcacagttatcacaattcatggatcaaattaacccacttgctgagttaacgcaaaagcgt
agagtttctgcacttggtacgggtggtcttgcaagagatcgtgccggcgttgaagtgcgt
gacgttcacaactctcactacggtagaatttgtccaattgaaacaccagaaggtccatca
attggtctgatttcatcacttgcaacttacggtaaagttgatcaatatggatttattcaa
acaccatacttaaaagttgaccgttcaagcggtaaacctgtagttattcaagatatgcat
tatttaacagcagatgaagaatatcatgaagtcattgcatcagctgcaacaacacttgat
gaagatggcgttattgttgaagaaaaagtgattggtcgtcatcgtggtgaaacatctatg
tttgacatcgatgaagtgacttacatggacgttagtcctaagcaaattgtatcagttgca
acttcaaccattccattcttagagcatgatgatgcatcacgtgcactaatgggtgcgaac
atgcaacgtcaagctgtacctttgctaaaaccagattcacctattgttggtacaggtatt
gaacatcgtgctgctaaagactctggtgctgtagtcgtatcagatgttagtggatttgtt
acatacgctgatggtaaaaaagtgatgattacccaaaaaccagacgagaaaatcgttgtt
ggtaataatgtgatctacgatccaacagttgagtttaattatcaaagtgcaaaaacactt
aaagattatggtatgggtgaaaccaaaacatttgaattgattaatttctttagatcaaac
caagatacaaacatcttacaacgacctttagtaaaagaaggagagtacgttgaaaaaggt
gatatcttagcagatggtcaatcaacagacaacggtgaacttgcacttggtagaaacgtt
accgtggcatttatgacatgggaaggttacaactatgaagatgctgtcatcatgtcagaa
gatcttgttaaaaatgacgtttatacatcaatccatattgatgaatacgaaattgaaaca
cgtgaactaaaaacaggtagtggacgtgaagaaattacacgtgaagtaccaaatgctggt
tatgaagcgttaaagaacttagatgaacgtggtatcgttattccaggtagtgaagtaaaa
gaaggcgatatcttagttggtaagatcactccaaaaggtgtgtttgaaccaagtccatct
gaaaagttaattcatgcagttatcggtgaaaaatcaagagaatatagagattcatcatta
agagttccacatggtggaggcggtaccgttgtatcgatccaatacttctctaagaaaaat
ggagatgtacttccaagtggagttaatgaatcaattacagtttatgtcgctaagaaacgt
aagatttctgaaggggataaaatggcaggtcgtcacggtaataaaggggttatctctaga
atattaccaagagaagatatgccatacatggctgatggtacaccaattgacatcatgtta
aacccactaggggttccatcacgtatgaacatcggtcagatcctagaaatccatttaggt
atcgcagcgaagaatttaggtattaagattgcaactccagtatttgatgggttaaatgat
catgacttaaagtcgatcatgaaagaggcaagagataaagcatatgattctatcaaacct
tctaaaccaatcgaagagatggatgaacttgaaaaatataactatgaacttgacaaaaag
atgcttgcagaatttggtgaagatggtaaagtcacattatatgatggacgtaccggagag
ccatttgaaaatagagtatctgttggtgtcatgtacatgattaaactatcacacatggtt
gatgacaaattgcatgcaagatccgtaggaccttacacacttgtaacacaacaaccaatg
ggtggtaaagcacaaaacggtggacaacgtttcggtgaaatggaagtttgggcattatat
gcttatggtgctgcacatacacttcaagaaatgttaacggttaaatcagatgatatgatt
ggtagaaataaagtctacagctcaattacacatgataaaccaattccacaagcttcaatt
ccagaatcatttagagtgcttacaagagaacttcaagcattagggttatacgttgagtta
atcgatgcgaacactggagaaaatgaagcaaccaaatcacttgttgatcatacgaaaaca
acgtttactaaaggagggtatcgctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system