KEGG   Tribolium castaneum (red flour beetle): 100141956
Entry
100141956         CDS       T01046                                 
Name
(RefSeq) cullin-4A
  KO
K10609  cullin 4
Organism
tca  Tribolium castaneum (red flour beetle)
Pathway
tca03420  Nucleotide excision repair
tca04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tca00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100141956
  09124 Replication and repair
   03420 Nucleotide excision repair
    100141956
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tca04121]
    100141956
   03400 DNA repair and recombination proteins [BR:tca03400]
    100141956
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tca04147]
    100141956
Ubiquitin system [BR:tca04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Cullin
     100141956
DNA repair and recombination proteins [BR:tca03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      100141956
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      100141956
Exosome [BR:tca04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100141956
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 DUF3045 Cas_Cas5d
Other DBs
NCBI-GeneID: 100141956
NCBI-ProteinID: XP_001814199
UniProt: A0A139WP03
Position
LGX:complement(3394246..3397466)
AA seq 789 aa
MSRHVSNVEDRSPVKRLEEPQRSPKKLRLEIEIDENMSDNSPERNRRANFSNVNGVNRNL
NIHSVKPTTKKLIIKNFKSEPKLPDDYHETTWEKLKSAVIAIQQSKPNEYLLEELYQAVG
NMCSHKMSHILYNGLSHLIEAHVCSNIERFITEPMDRFLFLKKMNDTWQSHCNQMIMIRG
IFLYLDRTYVLQNPNISSIWDMGLDLFRKYFMLHTLVQTRVVEGLLMLIEKERQGDKVDR
TLLKSLLRMLTDLQIYNKAFEQKFLQATERLYATEGQRLMQELEVPEFLAHVDKRIHEEN
ERVIHYLDCSTKYQLIHTVEKQLLSEHINNILQKGLDNLLEENRLHDLSLLYQLFSRVKN
GLHELCLAFNAFIKKKGRTIVIDPEKDKTMVQELLDFKDAMDNIVACCFKKNEMFSNSLK
EAFEHFINQRTNKPAELIAKFVDSKLRAGNKEATEEELERLLDKIMVLFRFIHGKDVFEA
FYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFKQH
LNISTLDLIPLDMTVNILTMGYWPTYTPMDVTLPPQMVKFQDIFKEFYLSKHNGRKLQWQ
PTLGHCVLKARFKAGQKELVVSLFQTLVILLFNESDEHSFEYIKAATNIEDGELRRTLQS
LACGKARVLNKIPKGREIEDNDKFKFNNDFVNKLFRIKINQIQMKETTEEQKATEERVFQ
DRQYQIDAAIVRIMKMRKTLSHNLLISELLAQLKFPVKPSDLKKRIESLIDRDYMERDKD
NSNQYNYVA
NT seq 2370 nt   +upstreamnt  +downstreamnt
atgtcaaggcacgttagtaacgttgaggaccgaagtcctgtgaagaggttggaagagccc
caaagatcgccgaaaaagctgcgtttggagatcgaaattgatgaaaacatgagtgacaat
tcgcctgaacgaaaccgacgagcgaatttttcaaacgtgaacggcgtcaaccgcaattta
aacatccactctgtcaagccaaccaccaaaaagcttatcataaagaatttcaaaagtgaa
ccgaagctcccggacgactaccatgagaccacctgggagaagctaaagagtgcggtcatt
gcaatacaacaatcaaaacccaacgaataccttctggaggagctctaccaggcggttggg
aacatgtgcagccacaaaatgtcccacattctgtacaacgggctctcgcacctgatcgag
gcgcacgtgtgcagcaacatcgaacggttcatcacagagcccatggaccgtttcctgttt
ttgaaaaaaatgaacgacacttggcaatctcactgtaatcaaatgatcatgatcaggggc
atcttcctgtaccttgaccgcacgtacgtgctccagaaccccaacatttcctcgatctgg
gacatgggcttagatttatttcgcaagtacttcatgttgcacactttagtccaaacgcgc
gtagtcgaaggtttgttaatgttgatcgaaaaggagcgacaaggcgataaagtcgaccgg
actttactcaagtccctgctacgcatgctaaccgacctgcagatttacaacaaagctttt
gaacaaaaattcctgcaagcgactgagcgcttgtacgcgaccgaaggacaaaggcttatg
caagaactcgaagtgcctgaatttttggctcatgtagataaaagaattcacgaagaaaac
gaaagggtcattcattatttagactgtagtacaaaatatcaattaattcacacggtcgag
aaacagctgcttagtgaacacattaataatattctccaaaaagggctcgacaacctcctt
gaggagaaccgtctgcatgacttgtcgctcctctaccagcttttcagtcgcgtcaaaaac
ggccttcatgagctatgtctcgcgtttaacgcgtttattaagaaaaaggggcgcactatt
gtcattgaccccgaaaaagataaaacaatggtgcaagaattgctagatttcaaggacgcc
atggataacatcgtcgcttgttgcttcaagaaaaacgaaatgttcagcaactcgctcaag
gaggcgttcgaacatttcatcaaccaacgcaccaacaagccagccgaactcattgcaaaa
ttcgtggactcgaagctgcgcgctggcaacaaggaggcaaccgaggaggagctggagcgc
cttctggacaaaataatggtcctgttccggtttatccacggtaaagacgtgttcgaggcc
ttctataaaaaagacttggcgaagcgattgctcgtgggcaaatcggcgagtgtggacgcc
gagaagagcatgttgagtaaattaaagcaggaatgtggtggcggtttcacgtcgaagtta
gaaggaatgttcaaagacatggagttgagtaaagacatcaacgtggcgtttaagcaacac
ttgaatattagcacgcttgatttgatacctctagacatgacagttaatattttgacaatg
gggtattggcccacttataccccaatggacgtgaccctgccgccgcaaatggtcaagttc
caagacatcttcaaagagttttacttaagtaagcacaacgggaggaaactgcagtggcag
ccgactttggggcattgcgtcctcaaggcgaggtttaaagcggggcagaaggagttagtc
gtttcgctttttcaaactctggtgatactcctctttaacgagtctgatgagcacagtttt
gagtacattaaggcagctactaatatcgaagatggggagttgaggaggactttacagagt
ctggcttgtgggaaggctagagtcttgaataaaattccgaaaggaagggaaattgaggat
aacgacaagtttaaatttaataatgactttgtaaataaacttttccgtatcaagattaac
caaatacaaatgaaggagaccaccgaggaacagaaagcaactgaggaacgggtcttccaa
gaccggcaatatcaaattgatgcggcaatcgtgagaatcatgaaaatgagaaagacttta
agccacaatttgctcattagtgaactcttagcacagctaaagtttcctgttaagccttct
gatttgaagaaacgcattgagtctctcattgatagagactacatggaacgtgataaagat
aattccaaccaatacaactatgtggcttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (76)   
   KEGG ORTHOLOGY (1)   
   RefGene (72)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (90)   

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