KEGG   Tribolium castaneum (red flour beetle): 659720
Entry
659720            CDS       T01046                                 
Name
(RefSeq) cysteine protease ATG4D
  KO
K08342  cysteine protease ATG4 [EC:3.4.22.-]
Organism
tca  Tribolium castaneum (red flour beetle)
Pathway
tca04136  Autophagy - other
tca04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:tca00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    659720
   04136 Autophagy - other
    659720
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:tca01002]
    659720
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tca04131]
    659720
   03029 Mitochondrial biogenesis [BR:tca03029]
    659720
Peptidases and inhibitors [BR:tca01002]
 Cysteine peptidases
  Family C54: Aut2 peptidase family
   659720
Membrane trafficking [BR:tca04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    659720
Mitochondrial biogenesis [BR:tca03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    659720
SSDB
Motif
Pfam: Peptidase_C54
Other DBs
NCBI-GeneID: 659720
NCBI-ProteinID: XP_008193420
BEETLEBASE: TC014208
UniProt: A0A139WNQ2
Position
LGX:3197987..3205504
AA seq 428 aa
MNTQDEGNNSDVEGKVKNRLLSMWNNVKYGMKLKTNFSKESPVWLLGKCYRRIESPSSDS
TELGTDVAAFQSQSEIASSDDEGFEGFKKDFISRLWLTYRREFPILNGSNYSSDCGWGCM
LRSGQMLIAQALVCHILGRDWRWQPDHQPTTRESFIEVVNHRKIIKWFGDKPSRNSPFSI
HTLVALGEASGKKAGDWYGPGFVAHLFRQAFKRASEDNYEFDSLTVCVAQDCAVYIKDVM
EECTDKNGKWKSLILLIPVRLGAEKFNSIYAPCLTTLFSLKQCIGIIGGRPKHSLYFVGY
QDDKLIHLDPHYCQEVVDVWAVDFPLTSFHCRSPRKIHLSKMDPSCCIGFYCPTKESFFN
LIEIVQPLVIPPGRTDSPGSEYPMFIFCDGYSRDAQLSPKKLPPSELEYSMDSSTDGDDM
GTEAFEIL
NT seq 1287 nt   +upstreamnt  +downstreamnt
atgaacacacaggatgaagggaacaattcggacgtcgaaggcaaagtcaaaaacagactc
ctctcaatgtggaataacgtgaaatatgggatgaagctcaagacgaacttctcgaaagaa
tctcccgtctggctcttgggcaagtgctaccgcaggatcgaaagtccctcctctgacagc
accgagctcgggaccgacgttgcagccttccagagccagagcgagatcgccagtagcgac
gacgaaggcttcgaaggattcaaaaaagacttcattagcagattatggctaacatatcgg
cgcgagttccccattctgaacggctccaactacagcagcgactgcggctggggctgcatg
ctgcggagcgggcaaatgctgatcgcccaagccctagtctgccacattctgggcagggac
tggcggtggcagcccgaccaccagcctacgacgagggagagtttcatcgaggtggtgaac
caccggaaaattatcaaatggttcggcgacaagccctccaggaacagccccttttccatc
cacacgctcgtggccttgggcgaagcctcgggcaagaaggccggcgactggtacggcccc
gggttcgtcgcgcacctctttcggcaggcgttcaagcgcgcctctgaggacaactacgag
ttcgattcgctgacggtgtgtgtggcccaagactgcgcagtttacattaaggatgtgatg
gaggagtgcacggataaaaacggcaagtggaaatctctgattttgctgatcccggtccgg
ttaggggccgagaagttcaactcgatttacgccccctgtctcacgaccctgttcagcttg
aagcagtgcataggcataatcggggggcgccctaaacattccttgtacttcgtaggttac
caagacgataagttgattcatttggacccgcattactgccaggaagttgtcgatgtttgg
gcggttgattttcccttgacgagtttccactgtaggtcgccgcggaaaatccacttaagc
aaaatggatccgtcttgttgtatcggattttattgccctaccaaagagagtttttttaat
ctcattgaaattgtccagcctttggttattcctcccggacgaactgatagccccggcagc
gaatatcccatgttcatattctgtgatgggtacagccgtgatgcccagttgtccccgaaa
aaattacctccatctgagttagaatattccatggatagtagcactgacggcgatgacatg
ggcaccgaggcgtttgaaatactgtag

  All links  
Gene (29)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   BEETLEBASE (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (35)   

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