KEGG   Tribolium castaneum (red flour beetle): 659912
Entry
659912            CDS       T01046                                 
Name
(RefSeq) collagen alpha-2(IV) chain
Organism
tca  Tribolium castaneum (red flour beetle)
SSDB
Motif
Pfam: Cornifin BRICHOS
Other DBs
NCBI-GeneID: 659912
NCBI-ProteinID: XP_008192366
UniProt: D6WIK8
Position
LG3:complement(9637541..9644641)
AA seq 1489 aa
MARLILICVIVSAYLGGIFSQEKTEVVSNTEDPSLSNSILKGATKSGTLFDYQTRVVAYK
DLIESRCLIEFLKASESYIGQSNHKPRLDNVTKNFFMTENQLSKRQIWTIAGQRVVDFCR
GFPTYLIHDLKTNDQNSIFQDSLNEGIAARKKRATKHFFVGRVRGQTQSQYLNYGNSKDP
GKAEAESSYGSSKAVVSGSSGMGQAQSQSVPVGCDECYGEGYDQEQGLYYGRPGGTPEFP
GEQYRKPGRPSIPGYPAEPGGRPGVPGYPRGPEERPGYPGGPAVPGYPGLPGGRPGIPEY
PGAPGGRPAIPGYPGGPEGRPEIPGYPGKPEERPGVPGFPGRPDGRPGVPGYPGRPGERP
EIPGYPHIPEGRPRIPGYPGRPEERPAYPEGPVEKPGIPGYPEGPEGRPGFPGRPEERPV
VPGYPSLPGGRPGVPGYPRGPDGRPAFPGYPQPGVPGYSKQPGQLPGVPGVPGYPGEPEA
KPGVPGYPRPGVPGYPGGEIPSHPGGEKPGYPLSPTGPGVPGYPGYPGYPQYPTGPSPGL
PEGPSRPGYPSGPEKPGYPPTEGYPLRPGYPTPPSYPVPGEVGYPTPPGKVSTGKFSGQL
SGDYEAEVGQRGKFSGIFSGQYEAHHNGKIAGKYVDGKYYPGQPAGPSYPGYPGLPTPPG
YPGPAPYPTAPGGVGKITYPVGPGGVPGYPGTPTYPSIPGYPTPGHPVTEPGYPGVPSYP
GAPRPGVPSGPSGPSYPGGQIPGYPGVPSPGFPGGPPPGYPGVPTAGYPGIPTGPGVPSY
PGGPSVSFPGVPSVPPGVPSYPGAPSPGYPGAPSSGYPGAPSPGYPGAPSPGYPGAPSPG
YPGAPYPGYPEAPTPSYPGAPTPGYPGAPSPGYPGAPAPGYPEAPYPGYPGVPSPGYPGA
PSPGYPGVPSGPGIPSYPQGPPPGAPGYPGVPTGPSYPGAPGGPGYPEPRPGQPGYPGVP
PGYPGAPGETPSRLTYPGAPGQPGYPGAPTGEEADGADSQVQTSVQQTNNETQASAQAQG
RYAGGMAQSQVSGTYSGSGSFSASAGSDDGKKGALSQVSGGKEGALSSAQGRGGLGQSQA
QVQLASESGDTISSAQTDGWNHGSQTQVQASGKGGMADAQANGPGSTSSQAQIGFTPYDE
NERNDQSTPFRGGGTASAQSGTYSGQAQSQIQGKFQYGIKYTGAAQAGSGSRDTIALARN
QSRPEGLTGTFPKFTPLNFTSGRNPNTNPQDLLMQTSRKSVHKTLSMDVATQKAPTEDQT
VPIPDETEDTATEDYHDEDYDYDSDYSTQKPITKSIISQSSKTQRQHIVLDPLEDLDATV
QQSYGYPPDGTILQPGETIPGSPGYQIPAGFRGRVKAIANGPNTYATGRNSQAQSVTLTP
GTGRIIYKKPIYAVTSNSHQNGHMGFGSGYTYQPATYQVKSGKSLPNFISLSKSETGSKN
PYTGQKTPKVYYAQSSSCGVFTNTCVFNGSGKLCFPKPKTNPDGSFMTC
NT seq 4470 nt   +upstreamnt  +downstreamnt
atggcgcggttaattttaatttgtgtcatagtgagtgcttatctaggtggcatattttcg
caggaaaaaacagaggttgtttctaatactgaagatccatctctgtccaactcgatactt
aaaggagcaacaaagtcgggaactttgtttgattaccaaactagagtagtagcttataaa
gatctcatagaatcaagatgtttgatagaatttttaaaagctagcgaaagctacattgga
cagtcgaaccataaaccacggctggataatgtcaccaagaatttttttatgactgaaaat
cagctctccaaaagacaaatatggacaatagctgggcaaagagttgtagatttttgtcgc
ggttttccaacttatctcatccacgatttaaaaacaaacgaccaaaacagtatttttcaa
gacagtctaaacgagggtattgccgcaagaaaaaaacgtgcaactaaacattttttcgtt
ggaagggttagaggacaaacacaatcacaatatctaaattatggtaacagcaaagatcct
ggaaaagctgaagccgaatcaagttatggaagttcaaaggcagtagtcagtggtagtagc
ggaatgggccaagcccagagtcaaagtgttccagtgggttgtgacgaatgttatggcgaa
ggttacgatcaagaacaagggctttattatggaagacctgggggtacaccggaatttccg
ggagaacaatatcgcaagcctggaagacctagcattccgggatatccagctgaacctgga
ggaagacccggagttcccggatatcctagagggccagaagaaagacccggatatccagga
ggacccgcagttcccggatatccgggattaccaggaggtagacccggaattcctgaatac
ccgggagcaccagggggacgacctgcaattcctggatatccaggaggaccagaaggaaga
cccgaaattccaggatatccaggaaaaccagaagaaagacctggcgttccgggatttcca
gggagaccagatgggcggcctggtgtgccaggatatccaggaagaccaggagaacgacca
gaaatacccggatatcctcatatacctgagggaagaccaagaattcctggatatccagga
agacccgaagaaagacctgcatatccagagggaccagtagaaaaacctggaattcctggt
tatcctgagggaccagaaggtagacccggatttccaggacgaccagaagaaagacctgta
gtccccggctacccgagtttaccagggggaagaccgggagtaccgggttatccaagagga
ccggatggacggccagcatttccagggtatccacaacctggagttcccggatattcaaaa
caacccggacaactacctggagttcccggagtaccaggatatcccggtgaacccgaagca
aaacctggtgtaccaggataccctcgaccgggagttcctgggtaccctgggggagaaata
ccgtcgcatccaggaggagaaaagcccggatatccgctttcacctactggacctggagta
ccgggttaccctggttatcctggctacccacagtaccctacagggccttctccaggacta
ccagaaggtccttcacggcccggttatcctagcggtccggaaaagccaggatatcctcca
actgaaggctatccattaagaccgggatatccaacaccacccagctatccagtgccggga
gaagtgggatatcctactccacctggaaaagtttccaccggcaaatttagtggacaactt
tccggagattatgaagcagaagttggacaaaggggtaaattttctggaatcttttccgga
caatatgaagctcatcataatggaaaaattgccggaaaatatgttgatggaaaatactat
ccaggccagcctgcaggtcctagttacccgggatatcccggcttaccaactccaccaggt
tatcctggacctgcaccttatcctactgcacccggcggcgtaggcaaaatcacgtatccc
gtaggacctggtggagtaccgggttaccctggaacaccaacttatccaagcattcccgga
tatccaacacccggacacccagtaacagaaccgggatatccaggagtaccaagttacccg
ggagcaccacgtccaggagtaccatccggcccaagcggtccaagttatcccggtggtcaa
atccccggctatccaggagtaccatcaccgggtttcccaggaggtccacctccaggttat
ccaggagttccaacggcaggttatccaggaattccaactggcccaggggttccaagttac
cctggaggtccttctgttagttttcccggagtaccatcagttcctccaggagttccaagt
tatccaggagctccatctcctggctatccaggagccccatcttctggctatccaggagct
ccatcgcctggctatccaggagctccatcgcctggctatccaggagctccatcgcctggc
tatccaggagccccatatcctggttatccagaagctccgactccaagctatccaggagct
ccaacccctggttatccaggagctccgtctccgggctatccaggcgcaccagccccgggt
tacccagaagccccatatccgggctacccaggagttccatctcctggctatccaggggct
ccatctcctggttatccgggcgtaccatcaggtccaggtattccaagttatccacaaggt
ccacctccaggtgctcctggttatccaggagttccaacaggtccaagttatcccggagcg
ccaggaggacccggctaccccgaaccaagaccaggtcaaccaggttatccaggagtacca
cccggttatcccggagccccaggcgaaactccaagtaggctcacttatcctggagctcct
ggccaacccggatatcccggtgcaccaacgggagaagaagccgacggtgccgactctcaa
gtacaaacatccgtccaacaaaccaataacgaaacacaagcaagtgctcaagctcaagga
cgatacgctggaggaatggcccagtctcaagtttccggtacttacagcggttccggttct
ttcagtgcttcagctggaagtgatgatggcaaaaaaggggcattatcacaagtttccggg
ggtaaggaaggtgcattgagctcagctcaaggaagaggcggcttgggtcaaagtcaagca
caagttcaactagcatcagaaagtggtgataccatatcaagtgctcagacggatggatgg
aaccacggttcgcaaacacaggtacaagcaagtgggaaaggaggaatggcagatgctcaa
gcgaacggacctggaagcacctcgtctcaggctcaaattgggttcactccgtatgacgaa
aacgaaagaaacgaccaatcgacgccttttagaggcggaggaacagcaagtgcccaaagt
ggtacttactcaggacaagcccaaagtcaaatccaggggaagtttcaatacggcattaaa
tacacgggagctgcacaagccggttcagggagcagagacacaatagctttggctcggaac
cagtcaagacctgaaggacttacaggaaccttcccaaaattcacacctttgaatttcact
tctgggcgaaacccaaacactaatccacaagacttactgatgcaaactagccgaaaatca
gttcataaaacactaagtatggacgtagcaacccaaaaggcaccaactgaagaccaaact
gttccaatccctgacgaaaccgaagacacagctacagaagactaccatgacgaagactac
gactacgactcagactactccacccaaaaacccataaccaaaagcataatctcccaatcc
tccaaaacgcaacgccagcacatcgtgctcgaccctctcgaagacctcgatgccacagtg
caacaaagctacgggtaccctcccgatggtaccatcctccaacctggagaaacgattcct
ggctctcccggctaccagatccctgccgggttccggggacgtgtcaaggccatcgctaac
gggccgaacacctacgccacgggcagaaactcgcaagctcagagtgtgacactgacacca
gggactggacgcattatttacaaaaaaccgatctatgcagtcacctctaattcgcaccaa
aacggacatatgggcttcgggtcgggatatacttatcaaccggcgacgtatcaagtcaag
agcgggaaatctctaccgaattttatttccctgagcaagtcggaaacagggtctaagaac
ccttacactggacaaaagaccccgaaggtgtattatgcccagtcttcgagttgtggggtt
ttcacgaatacttgcgtttttaatggaagtggaaaactgtgctttcccaagcccaagact
aaccccgatgggagttttatgacgtgttga

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Genome (1)   
   KEGG GENOME (1)   
Gene (271)   
   RefGene (268)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (281)   

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