KEGG   Tribolium castaneum (red flour beetle): 661853
Entry
661853            CDS       T01046                                 
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
  KO
K10636  E3 ubiquitin-protein ligase AMFR [EC:2.3.2.36]
Organism
tca  Tribolium castaneum (red flour beetle)
Pathway
tca04137  Mitophagy - animal
tca04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tca00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    661853
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    661853
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tca04121]
    661853
Enzymes [BR:tca01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.36  RING-type E3 ubiquitin transferase (cysteine targeting)
     661853
Ubiquitin system [BR:tca04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    661853
  Multi subunit Ring-finger type E3
   ERAD complex
    661853
   LMBR1L-GP78-UBAC2 complex
    661853
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-C3HC4 CUE zf-RING_11 G2BR zf-C3HC4_3 zf-rbx1 zf-ANAPC11 zf-RING_UBOX zf-RING_5 zf-RING_16 Prok-RING_4 CRCB
Other DBs
NCBI-GeneID: 661853
NCBI-ProteinID: XP_015837138
Position
LG7:complement(7139939..7155269)
AA seq 532 aa
MEIDKWRVIIPRKFLKKVLKTMINMAFCWLILVGTAIQKLVFGELRVSEQQHLKDKFWNF
VFYKFIFVFGIINVQYIDEVLLWCSWFSLLGFLHLLSQLSKDRFEYLSFSPTTPLWSHVK
LLFLLTAIFTLSGFMLLVSVFVGFFGGFNTFAFMSAEVVLLSIRTLHVIIRYALHLYDMR
QEGASSVSANEENRVWEKRGPIAYYTELSFELTALIIDFVHHLHMLVWSNIFLSMASLVI
CMQLRYLFHEIQRRYKKHRNYLWVRNHLEQNYPMASSEELADNSDNCAICWEKMESARKL
PCTHLFHNTCLLSWLEQDTSCPTCRLALNIQTPSTSRIDPPDLQVDAPQPQRRQLNHFFH
FDGSRYVSWLPSFSVEVSHAQLMRQDNAPASNSQLDAMARQVQQLFPHIPISTIINDLRV
TRSVEITIENVLDGRLVAPTMYREPEVVPATNRAMSVWQASCDTDSQRNWDEFSVETVET
EDTSSLGSRFSKSSSEREKILHRRKENLIQSARKRYIEKQKAAAAAKVELQS
NT seq 1599 nt   +upstreamnt  +downstreamnt
atggaaatagacaagtggagggttataattccccgaaagttcttaaaaaaggtcctaaag
accatgatcaacatggctttctgttggctcatcctcgtgggtaccgcgatccagaagctg
gtgtttggcgaattacgcgtctctgaacagcaacatctcaaagataagttttggaatttc
gtattttataaattcatcttcgtattcggaatcatcaacgttcaatacatcgatgaggtg
ttgctgtggtgctcgtggttctcccttttgggatttctgcatctcctctcccagctcagc
aaagacagattcgaatatctgtctttttcgccgactacgccgctgtggagccacgtgaag
cttttgttcttgctaactgcgattttcacactatcgggcttcatgctgctggtgtcggtc
tttgtgggattcttcggcggatttaatacgtttgctttcatgtctgctgaggtggtgtta
ttgagtattcgtactctgcatgtgataatccggtacgccttgcatctgtacgacatgcga
caagaaggtgcgtcttcagtcagtgcaaatgaagagaatcgagtttgggaaaaacgaggt
cccatcgcctattacacggaattgagtttcgaactgacagctttaataatcgatttcgtt
catcatcttcatatgctagtttggagtaacattttcctctcaatggctagtctagtgatt
tgtatgcagttgagatatttgttccacgagattcagcggcgctacaaaaaacacaggaat
tatctgtgggtcaggaatcatctcgaacagaattacccgatggcgtcgtccgaagagttg
gccgacaattccgacaactgcgccatctgttgggaaaaaatggagtcggcgaggaagtta
ccgtgcactcatttgtttcacaacacttgtctgttgtcgtggctggagcaagacacttcc
tgtcccacttgtcgtctagccctcaacattcaaacgccctcaacgtcgcgaatcgatcct
cccgatttgcaagtggacgctcctcagccgcaacgtcgccagctcaatcatttctttcat
ttcgacggttcaagatacgtttcttggttgccgagtttttccgtcgaagtgagtcatgct
caactcatgcgacaagacaacgcgccggcgtccaattcgcaattggatgcgatggcacgt
caagtgcagcaattgtttccacacattccgatttcgacaattattaacgatctcagggta
acgaggtcggtggaaatcacgattgaaaatgttttggatggaagattggtagcgccgact
atgtatagggagcccgaggtggtgccggcgacgaatagggcgatgtcggtatggcaggct
agctgcgataccgactcgcagaggaattgggatgagttcagtgtggagacggttgaaact
gaagatacgagcagtttggggagcagattttcgaagtcttcgtcggagcgcgaaaagatt
ctccacagacgcaaagagaatttgattcagagcgccagaaaacgctacatcgagaaacaa
aaagccgccgctgctgcaaaagtggagctacaaagttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (14)   
   Pfam (14)   
All databases (62)   

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