KEGG   Tribolium castaneum (red flour beetle): 663417
Entry
663417            CDS       T01046                                 
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM9
  KO
K10649  tripartite motif-containing protein 9/67
Organism
tca  Tribolium castaneum (red flour beetle)
Brite
KEGG Orthology (KO) [BR:tca00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tca04131]
    663417
   04121 Ubiquitin system [BR:tca04121]
    663417
Membrane trafficking [BR:tca04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Others
    663417
Ubiquitin system [BR:tca04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    663417
SSDB
Motif
Pfam: SPRY fn3 zf-B_box zf-RING_UBOX zf-C3HC4_4 zf-C3HC4_3 zf-RING_5 Baculo_PEP_C Gp-FAR-1 Apolipoprotein Uso1_p115_C Exonuc_VII_L
Other DBs
NCBI-GeneID: 663417
NCBI-ProteinID: XP_015834518
Position
LG4:complement(2958873..2976725)
AA seq 684 aa
MEEELRCPSCKQFYTNPVLLPCFHALCLSCAVHLQQPAQSHGAAGAENAESVASGSSGDY
QESDKLSILSETDSGVVCTSRPNSYVGTPSGGLFPSALSLACPLCHKLVYFDENGAHNLP
KYRVMQAIVERYSEVRNLTLKCQMCETEPAREATVMCEQCEVLYCETCRESCHPARGPLA
KHVLAEPKRCSGTMLRNRDDKCTEHSDENLNMYCLVCKIGVCALCLMDSRHASHDVQALA
VMCKTQKTELSHNLQQLSERARSTTEFIQRLKGMSDKVNENCEEFEAMVSAQCDALIEAI
HHRRAQLLECIRQDKELRVRALKEQVTTCTSRLQQTTALLQFCIEALKETDSSAFLQVGS
MLISRVANTDHSWHKEWTAPRVSPHFDLTLDDKSVLRAIDQLNFIQMKPYIDGEERMPAA
PTAPTIIPEECSAENNSVTVAWQPPAQSHVEGYVLELDDGNGGDFREVYCGTETICTVDG
LHFHCMYNARVKAFNSSGEGEYSELIGLQTAEVAWFTFDPILSGPGLQYSEDSATVTGEG
WEHRVALGSVGFSRGVHYWEFTIDKYDADTDPAFGIARIDVTRDKMLGKDDKGWAMYIDR
QRSWFQHAGGHEQRVEGGITAGSTVGVLLDLNHHVLSFFVNEEPQGAVAFRDLYGVFYPA
VSINRGVSVTLHTALDPPSDCEET
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggaggaggagttgcgttgtccgtcgtgcaaacagttctacaccaaccccgtcctgctg
ccgtgcttccacgctctgtgcctcagctgcgccgtgcacctgcagcagcccgcccagagc
catggcgccgccggcgccgagaacgccgagagcgtggcctccggcagctccggggactac
caggagagcgacaagctgtccatcctgagcgagacggacagcggcgtggtgtgcacctcg
cgccccaacagctacgtgggcacccccagcggcggcctgttccccagcgccctgagcctc
gcctgccccctgtgccacaagctggtgtacttcgacgagaacggcgcccacaacctgccc
aagtaccgcgtcatgcaggcgatcgtcgagcggtacagcgaggtcaggaatctgacgctg
aaatgtcagatgtgcgagacggagccggcgagggaagccacggtgatgtgcgaacaatgc
gaggtgctttactgcgagacttgccgcgagtcctgccatccggcgagggggcccttggcc
aagcatgtgctcgcggaaccgaagcgctgctcggggacgatgctcaggaatagggatgat
aaatgcacggagcattccgacgaaaatctgaacatgtactgcttagtgtgcaagattggt
gtctgtgctttgtgtttgatggactcgagacatgcttcccatgatgtccaagcgcttgcc
gtcatgtgcaagactcaaaagactgaattatctcataacttgcaacaactgtctgagcga
gcccgatcaacgacagaattcatccagcgtctcaagggaatgagcgataaagttaatgag
aactgcgaggagttcgaggcaatggtatcagctcaatgcgatgcattaatcgaagccatt
caccacagacgcgctcaactactcgaatgcattcgccaagataaggagctaagggttcga
gctttaaaggaacaagtcactacctgcacaagtagattacagcaaactacggctttactc
cagttctgcatcgaagctctaaaggaaacagatagttcagcgtttcttcaggtcggctca
atgctaatcagccgagtggcaaacaccgaccattcctggcacaaggaatggacagctccg
cgggtctcgcctcatttcgatctcactttagacgataagtccgtcctcagagcgattgat
cagctcaactttattcaaatgaaaccgtacattgatggagaagaaagaatgcctgcagct
ccgactgcaccaacaatcatacccgaagaatgcagtgctgaaaataactcggtcacagtg
gcgtggcagcctccagctcaaagtcacgtcgagggttacgttttagaattggacgatggg
aacggcggtgattttagggaagtctactgcgggactgaaacaatatgcacagtagacggg
cttcatttccactgcatgtataatgcaagagtcaaggcgtttaatagttcaggtgaaggg
gaatatagcgaacttattgggctacagacggctgaagttgcttggtttacgttcgacccg
attttgtcgggcccgggcctccagtattccgaagacagtgccacggtaaccggcgagggt
tgggagcacagagtggcgctaggtagtgtcggattcagccgcggggtgcactactgggaa
ttcactatagacaagtacgatgctgacactgaccctgcgttcggtattgcgagaatagac
gtgactagggataagatgttaggtaaagacgataaaggttgggccatgtacatagatcgc
caacggtcgtggttccaacacgctggagggcacgaacaaagggtcgagggtgggataacg
gcgggatcaacagtgggcgtacttttagatttgaatcaccacgttttgtcatttttcgtt
aatgaagaaccgcaaggagcggtcgcttttagggatctgtacggggtgttttatccagct
gttagtattaatcggggggttagcgtcaccttacacacggccctagatccgccatccgac
tgcgaagaaacttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (12)   
   Pfam (12)   
All databases (45)   

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