KEGG   Tribolium castaneum (red flour beetle): 663739
Entry
663739            CDS       T01046                                 
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
  KO
K12604  CCR4-NOT transcription complex subunit 1
Organism
tca  Tribolium castaneum (red flour beetle)
Pathway
tca03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tca00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    663739 (CNOT1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tca03019]
    663739 (CNOT1)
Messenger RNA biogenesis [BR:tca03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     663739 (CNOT1)
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     663739 (CNOT1)
SSDB
Motif
Pfam: Not1 CNOT1_CAF1_bind CNOT1_TTP_bind DUF3819 CNOT1_HEAT PMBR
Other DBs
NCBI-GeneID: 663739
NCBI-ProteinID: XP_008190963
UniProt: D6WH28
Position
LG3:6028849..6040468
AA seq 2374 aa
MNLDSLSFTLSQISYLVASLTKKNYKQVVAELSKLVTLHGLEADRHLLQCLFSSVDFSES
TSKITAPSPQNQALLEQCSNLLNKPSLLTSVCYITDNPLSTNKAFKFGPQFFQQLSKCLR
LSAVQEVVFALALRHSSNQEVSSLAQAHLRLTVPTLIQSYIETEGSTRQHEGGLHETTPE
VLHLILSAVLKAPKDVGLTNNAHRAFLDTLQRDFPKDLVPVVLAPLVYPEHCELSPEMSS
EGPGLSGGMLETSLADLVAEIGFGFTSSVEECRNNLMKLGGRDITPATVARILTVMCRTH
SGLEDSLSLQSPGSFNKGNEGRTWNVEVFVQALKEVVPNFQWANTVAELDHPEFIIKDRQ
GLIILISALRHGLQTLGFHPETFPIDQFYKRWTNVEGQFSLVQHVLKNPDVFCFADYPAM
TVSVDVLKTPPEQDSKELANWRSLNLVELLLHMSECGLFTYVQELFKYPMHNCPDVLVLA
LLQIQGPVTLLRQELLSNLIPIFLLNHPNSAIILHHAWHTTNINIKSIIMHAMAEWYVRS
DCDQTRLSRILDVAQDLKALSMLLNAQNQQSYPFIIDLACLASRREYLKLEKWLSDKIRE
HGEPFVQACVKFLHRRCPQILGKSDDAMTKASSLPNETLTTIMICLQSCMNSVSPECQEA
IINVTTGCSILLKSRQQPALVRSRGVEGPFSVSAMSGQLYNHSAVDTIPGLTTNLASMTM
SGPTSSAFNLQGGLGPLVQSPGSPSRILGAGPSNSPFPMMPLQHQGPVGTSSSLVLGVNQ
IGNIGRMGPASNIDKSRIPEYNLFPEMSPNVSKDIEDEANSYFQRIYNHPPHPTLSIDEV
LDMLKRFQDSHNKREREVFNCMLRNLFEEYKFFPQYPEKELFITAQLFGGIIERSIVTSY
VALGLALRFVLEALKKPEGSKMYYFGIAALDRFKSRLKDYHKYCEHVRAIPHFSEFPSHL
QEYVEYGLQSVEPPNKPQGSVLPASMASMLAPPSTPVSQVYKPNSTISSSAPSKASTTTT
STLGSRPSIANATNIDTLLVATEKDEKVIAPPEALQDKIAFIFNNLSQLNLKPKCDELRE
LVLEEYWPWLSQYLVMKRASIELNFHGLYSNFLDTLNNNEVYRMVTKETYRNIKVLLRSD
KGIENFSDRSLLKNLGHWLGILTLARNKPILQIDLDLKSLLVEAYNKGQQELLYVVPFVA
KVIESCAKSKVFKPQNPWTMAIMNVLAELHQEQDLKLTLKFEIEVLCKNLDIDITQLKPT
MYLKDPERIHKIEYQLSQPSKKENVLIPSTQGNIPQGAINEPELVNMIPGQAANSPVTHN
NSTTPTSALSAPPEPRFSYGDIQIAGMTSFQTHTVVSPSILLFQNQPQLKPLVRSSIEHA
VQEWIAPVVDRSIKIALQTCEQIIRKDFALDPDEGRMRLAAHFMVRNLTAGMAMITCRDQ
LLSAINTHLKQALLANIGTPTLQQKEMIEQAASIIANDNMELACAFVQKTAVEKAIPEID
KRLMSEYDLRKMARQEGRRYCDAIALTYQAERMPEQIRLKVGGISNSQMAVYEEFARNIP
GFLPNERDSSILMQKQNLAPIETQIHPTTPFPLPQAAVLNDDLTITFEKLCLEIEQFVQA
TSGQPQYSHMSSNLLLIRECLLHTSRNRDPTPPQAMVQKCVESLQDSLGSTLSEADPVVM
RFKEIIVRVLKSFQDPRVFGQQWTNKLVTRFLTECREDYRYNIDAVDTLIKSGLVHVPQY
DLALAQCMENGVNYMGVNFAMQLVQLYLIDDRNNQFVTDNDLCNTIEMLAKIQTHMRQPP
EGLGNIIEILRQNPETPFFGDRAPVGPTLHIHNGILQVRGPYHDDPPGFVEKTDFLLREW
ISIYNQPQGRDSTKAFGVFVHQMNMHGILKTDELITRFFRLSTQLCVEAVYRIISDKTNA
QLPTVRAKCYNTLDAFVRLVALLVKHSGDANNTTTKIHLLNKVLGIVAGCLLQDHDTRTI
EFNQLPYQRIFTMLFLELNSPEPVLEAINFHVLSAYCHTLHILRPTKAAGFCYAWLELVS
HRIFMGRMLAGTPQQKCWPLYAQLLIDLFKYLSPFLRNAELAKPVTMLYKGTLRVLLVLL
HDFPEFLCDYHYNFCDEIPPNCIQMRNLILSAFPRNMRLPDPFTPNLKVDMLPEIAFGPR
ILANIPINITPAQFRKDLDSYLKARAPVTFLSELRSNLQISNEPGVRYNIPLMNALVLHV
GMQAIAYIRGKGHPPNMTTIAHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTH
YFSCTLLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPTYKFWSHEF
VHCAPEIEKLFESVARSCMVQKTAVQAQENEIQE
NT seq 7125 nt   +upstreamnt  +downstreamnt
atgaacctagactcgttgtcttttaccttgtcacaaataagttatttagttgcatcatta
accaaaaagaactacaagcaagtcgttgccgaactctcaaagttggtaactttgcatggt
ctggaggcggaccgtcacttgctccaatgtctattttcatcagtggacttttctgaatct
acaagcaaaataaccgctccatctccccaaaatcaagcattgttagagcagtgttcgaac
ttgttgaacaaaccctcgctgctgacgtctgtttgctacatcacagacaatccattgagc
accaacaaggctttcaaattcggaccccagttcttccagcagttgagcaagtgccttcgc
ctctcagctgtccaggaagtcgttttcgctctcgcccttcgccactcttcaaaccaggaa
gtttcgtctttagcccaggcacatttacggttaacggttccgactctcatccagtcgtat
atcgagactgaaggcagcacccgccagcacgaagggggcctccacgagaccacccccgag
gtcctccacttgatcctctccgctgttctgaaagcccccaaagacgttgggctcaccaac
aacgcgcaccgggcgtttctcgacactctccagcgcgacttccccaaagacctcgttccc
gtagtgttagcaccgttagtttaccccgaacattgtgaattgtcgccggaaatgtcatcc
gaaggccccggtttatccgggggcatgttagagacttcgctggccgatctggtggctgag
atcggtttcggttttacttcgtcggtggaagaatgtcggaacaacttgatgaagcttggg
ggacgcgacatcacccctgcaacagtcgctcggatccttaccgttatgtgccgaacacac
agtggccttgaagattcactcagtctacaatcgccaggcagttttaataagggcaatgag
gggcgcacttggaacgtggaggttttcgtccaggcgttgaaagaggtcgtgccgaacttt
caatgggccaacactgtggccgagttggaccatcccgaatttattattaaagatagacaa
ggactcattattctaataagtgcacttcgacatggcctccagacgctgggattccacccg
gaaacttttccaattgaccaattttataagagatggacgaacgtcgaggggcagttcagt
ctcgttcaacatgttctcaaaaatccagatgtgttctgttttgctgactatcccgcgatg
accgtcagtgttgacgttctcaaaacaccaccggaacaagacagcaaggaactggccaat
tggagatcgttaaatctggtcgagttgctcctgcacatgtctgaatgtggcttgttcact
tacgttcaagaactgttcaaatatccaatgcacaactgtcctgatgtcttagtcctcgca
ttgttacaaatacaagggcctgtaacgctcctcagacaagaattactctccaacttgatc
ccaatctttctcctgaatcacccaaactctgccataatactacaccatgcctggcacacc
accaacatcaatatcaaatccataataatgcatgccatggccgaatggtatgtgcgaagc
gactgcgatcaaacgagactgtcccgaattctggacgttgcccaagacctgaaagccctc
tcaatgctcctaaacgcccaaaaccaacaatcttatccgttcatcatcgacttggcttgt
cttgcatccagacgtgagtacctcaagctggaaaagtggctctcggataaaatcagagaa
cacggcgagccttttgtccaagcttgcgtcaagtttttgcaccgccgttgcccgcaaatc
ctgggcaaaagtgacgacgctatgaccaaagcttcgtccctacccaacgaaactttgacc
acgattatgatttgtttgcaatcttgcatgaacagcgtcagtcccgagtgccaagaggcg
ataatcaacgtcaccaccggttgcagtattttactgaaatcgcgtcaacagccggctctt
gttaggtccaggggcgttgaaggcccgttcagtgtttcggcaatgtcgggacagctttac
aaccactctgctgtcgatactattcccggtttgaccacgaatttggccagcatgacaatg
tcggggcccactagttcggcgtttaatttgcaagggggactcgggccgctagtgcagtct
cccgggtctccttcgcggattttgggtgctggtccttcaaacagtccgtttccgatgatg
ccgttgcaacatcagggaccagtagggaccagttcgtcgctggttttgggagttaatcaa
atcgggaatattggaaggatgggcccggcttcgaatattgataaaagcaggattcctgaa
tataacttgttcccggaaatgtcgcccaacgtatcgaaggatattgaagacgaagctaat
agctattttcaaaggatttacaatcatccgcctcatcctactttgtccattgatgaggtg
ttggatatgttgaagaggttccaggattcgcacaacaaacgggagagagaagttttcaac
tgcatgctgcgaaacctgttcgaagaatacaaattttttccgcaatacccggagaaggaa
ctgtttatcacagcccaactctttggtggcataatcgaaaggagcatcgtaacatcttac
gtcgcattggggttggctctgcgtttcgtcttagaagccctcaaaaaaccagagggatcc
aaaatgtattatttcggcatagcagcgctggatagattcaagagccgattgaaagactac
cacaaatattgcgagcacgtacgagccatacctcatttttccgaatttccgtcacattta
caagaatatgtcgagtacggtttgcaaagtgttgaaccaccaaataagccacaaggttca
gttttacccgccagtatggcttcgatgcttgcgccaccaagcactccagtttcgcaagtg
tataaaccgaattcgacgataagttcgagtgccccgagcaaggcaagtactacgaccact
agtactttggggagtagaccatcgatagccaatgcaacgaatattgacacacttctggtc
gccacagaaaaagatgagaaagtaattgcgccaccggaagctctccaggataaaattgcc
ttcatttttaataacttgagtcaactgaaccttaaaccgaagtgtgacgagttgcgtgag
ctagttttggaggaatactggccttggctatcgcaatatttggtaatgaagagggcgtca
atcgagttgaattttcacgggctgtattctaatttcttggacactttgaataacaacgaa
gtttacagaatggtcactaaagaaacgtacagaaacatcaaagttctgctacgatcggat
aaaggaatcgagaatttctctgatagatcattattgaagaatttgggacactggttgggc
attttgactttggcccgcaacaaaccaattcttcaaatcgatttagacctaaaatcactg
cttgtagaagcgtacaataaaggccaacaggaattgctgtacgtggtgccattcgtagcg
aaagtgatagaatcgtgcgctaaaagcaaagtcttcaagccacaaaacccctggaccatg
gccatcatgaacgtcctcgccgaactccaccaagagcaggacttgaaactcactctgaaa
ttcgaaatcgaagtgttgtgcaaaaacctcgatattgacataactcaactgaaaccgacc
atgtatttgaaagaccctgaacgcatccacaagatcgagtatcaattatctcaaccatct
aagaaagaaaacgttttaattccgtcaacacaaggcaacatccctcagggcgctataaac
gaaccggagttggtgaacatgattccgggacaggcggctaattctccagtcacacacaat
aacagtaccactccaacttcggcattgtctgcacctccggagccccgtttcagctatggg
gacatccaaattgccggaatgacatcttttcagacacacaccgtcgtcagtccttctatc
ctgctgttccaaaaccagccacagttgaaacctctagttcggtcgtcaattgaacatgct
gtgcaggagtggatcgcgcctgttgttgaccgctccattaaaatcgctttgcaaacgtgc
gaacaaatcatcagaaaggattttgctttggatcctgacgagggacgaatgagactagcg
gcgcactttatggtcaggaatctaaccgccggtatggcaatgataacgtgccgagaccaa
ttgttgtctgccataaatactcacctgaaacaggccctcttggcgaatattggtactcct
actttgcaacaaaaggagatgattgaacaagcggccagtattattgccaatgacaatatg
gagttggcgtgtgcctttgttcaaaaaacggcggtggagaaggctattcccgaaattgac
aagcggttgatgagcgagtacgatcttaggaagatggcgagacaagaaggacggcgctat
tgtgacgccattgcgctgacttaccaggccgagcgaatgcccgagcagattcgcctaaaa
gtgggcggaatttccaacagccaaatggctgtgtacgaagaattcgcccgaaatattcca
ggatttttaccgaacgaacgcgattcgagcattttgatgcaaaaacaaaacttggcaccg
attgaaacccagatacatccaaccacaccatttcccctaccacaagcagcggtgctcaac
gatgacttgaccataactttcgagaaattgtgtctcgaaatcgaacagtttgtccaagcc
acatccggacaaccacaatattcgcacatgagttctaatttgcttttgatcagagaatgt
cttctacatacttcgagaaatagggatccgactccgccacaagccatggtacaaaaatgc
gtggagagtctgcaagattcccttggttcgacattgagcgaagccgaccctgttgttatg
cgtttcaaggagattatagttagagttttgaaatcattccaagatccgcgtgttttcgga
caacagtggactaacaaactggttacgagatttttgactgaatgtcgtgaagattatcgt
tacaatatcgacgctgtcgatacgttgatcaagtctggtcttgttcatgttcctcagtat
gatttggcactggcccagtgcatggaaaacggcgtgaactatatgggagtcaactttgcc
atgcaattggtccagttgtatctgattgacgatcgcaataaccagtttgtgaccgataat
gacctttgtaatacgatcgaaatgttggccaagatacaaacccacatgagacagccacct
gaaggtttgggcaatatcatcgagatactgagacaaaatcctgaaacaccgttctttgga
gaccgcgcgcccgttggacctactcttcacattcacaatggaattcttcaggtgcgcggg
ccgtatcacgatgatcctccgggatttgtcgagaaaaccgacttcctcttaagggagtgg
ataagtatctacaaccagcctcaaggccgcgactcaacgaaagcgttcggcgtattcgtg
catcaaatgaacatgcatgggattctaaaaaccgacgaattgattacaagatttttcaga
ttgtccacacagttgtgcgtggaagcggtgtacagaataatttcagataagaccaacgca
cagttaccaacagtcagagcgaaatgttacaacacactggacgcgtttgttcgtctggtg
gccctcttggtgaaacattcaggtgatgccaataacaccactacaaaaatacatcttttg
aataaagttttggggatcgtcgccggctgtttgctccaagatcacgacacaagaaccatc
gagttcaatcagctgccctaccagaggatcttcaccatgttgttcctcgagttgaactcc
cccgaaccggtcttagaagccatcaatttccacgtgttgagcgcttattgccacactctc
cacatcttgcgtccgacgaaagccgccggtttttgctacgcctggttggagttggtgtcc
catcgaatcttcatggggcgcatgctagcggggactccgcaacaaaagtgttggcctttg
tacgcgcaacttctcattgatcttttcaagtatttgtcgccgtttttgaggaacgccgag
ttggccaaacctgtcaccatgctctacaaaggcaccttgcgcgtgctcttggtcctcctg
catgatttccccgagttcctatgcgactaccattacaatttctgcgatgagattccacca
aattgtattcaaatgagaaacttgattttgtcggcctttccgcgcaacatgaggctccct
gaccccttcacccccaacttgaaggtcgatatgttgccagagattgccttcggtcccaga
atcctagcaaatattccgatcaacatcactccagctcagttcagaaaggatctcgattcg
tatctgaaagctagggctccggtgaccttcctatcggaattgcggagcaatcttcagatt
tccaacgaacctggcgtgcgttacaacatccccttgatgaacgcgctggttctgcatgtg
ggcatgcaagctatcgcctatatcagaggcaagggacaccccccgaacatgaccaccatc
gcacacagtgcccatatggacatcttccagaacctcgccgtggatttggataccgaaggg
agatacttgttcctgaatgccatagcgaatcagctgcgttatcccaacagccacacgcac
tacttctcgtgcactttgttgtacttgttcgccgaagccaacactgaagccattcaagag
caaataacgcgagttcttctggagaggttgatcgtcaacagaccacatccgtgggggctg
ctcatcaccttcatcgagttgatcaaaaatcccacctacaagttttggagccacgagttc
gtgcactgcgctcccgaaattgaaaagttatttgagtcggttgccagatcatgcatggtg
cagaaaacagcagtgcaagcccaagaaaatgaaatccaagagtga

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