KEGG   Theobroma cacao (cacao): 18587050
Entry
18587050          CDS       T02994                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 35
  KO
K13116  ATP-dependent RNA helicase DDX41 [EC:5.6.2.7]
Organism
tcc  Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tcc03041]
    18587050
Enzymes [BR:tcc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     18587050
Spliceosome [BR:tcc03041]
 Complex C
  Other components
   Complex C specific factors
    18587050
SSDB
Motif
Pfam: DEAD Helicase_C ResIII zf-CCHC SecA_DEAD
Other DBs
NCBI-GeneID: 18587050
NCBI-ProteinID: XP_017984966
Position
10:complement(17577946..17582774)
AA seq 587 aa
MEEDDDYVEYIPVAKRRAMEAQKILQRKGKSSALEDENEKSNLAEVKPSLLVKATQLKKD
QPEISQMEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLHIRRMLKKE
RDLIWKQWHIIVDGEDIPPPIKNFKDMKFPDPILKKLKAKGIVQPTPIQVQGLPVILSGR
DMIGIAFTGSGKTLVFVLPLIMIALQEEMMMPILPGEGPFGLIVCPSRELARQTYEVVEQ
FLVPMRENGYPELRPLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDMLAKKKMNLDNCR
YLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVG
RAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEA
VAIHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHR
IGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVDAITNA
SGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI
NT seq 1764 nt   +upstreamnt  +downstreamnt
atggaggaagatgatgattacgttgagtatattccggttgcaaaacgccgagccatggaa
gctcaaaaaatcctacaaagaaagggcaagtcatctgcacttgaagatgagaatgaaaaa
tccaatcttgctgaagtgaaacctagtttgcttgtaaaagcaacccagctcaagaaggac
caacctgaaataagtcaaatggaacaaattgtacaacaggagaaagagatgattgaacat
ttatcggatcgaaagaccctgatgtcagtccgggaattggcaaaagggattacttatacg
gagcctttgttgactggatggaaaccacctttgcatattcgaaggatgttgaaaaaagag
agagatttgatttggaaacaatggcatattattgttgacggggaagatattccacctcct
attaagaattttaaggacatgaagtttccggatcccattttgaagaagttgaaggcaaag
gggattgtgcagccgactcctattcaagttcaagggctgcctgtgattttgtcaggaaga
gatatgattgggattgcgtttacagggtcgggaaaaacgcttgtgttcgtgcttccactg
attatgattgcattgcaggaggagatgatgatgccgatacttccaggagaaggccctttt
gggttgattgtctgtccttcaagggagcttgctaggcagacatatgaagtggtggagcag
tttttggtacctatgagggaaaatgggtatccagagctcagaccattgctttgtattggt
ggtgtggatatgaggtcccagttggatgttgtgaagaaaggggttcacattgttgttgct
actcctgggaggctgaaggatatgcttgccaagaagaagatgaatttagacaattgcagg
tacttgacattggatgaagcagatagactagtagatttaggctttgaagatgacatcagg
gaagtgtttgaccactttaaagcccaacggcaaacccttttgttctctgcaactatgcct
accaaaattcagaacttcgccagaagtgctttagtaaaaccagttactgttaatgttgga
agagcaggagctgcaaatctcgatgtgattcaggaggtcgagtatgtgaagcaagaggca
aagatagtctacctccttgaatgcctacaaaaaacccctccgcctgttttaatattttgt
gagaataaggctgatgtggatgatattcatgaatatctcctcttgaaaggagttgaagct
gtggccattcatggaggcaaggaccaagaagagagagagtatgccatttcatcctttaaa
gctggcaagaaggatgtcttagtcgcaactgatgttgcatcaaagggtttggattttcct
gatattcaacatgtgatcaattatgatatgcctgctgaaattgaaaactatgtccataga
ataggacgaacaggaagatgtggtaaaacgggaattgcaaccacattcataaataagaac
cagagtgagacaaccctgcttgatttgaagcaccttttgcaagaagccaaacagaggatt
ccacccgtcttggctgagctgaatgatccaatggaggatgtggatgcaatcaccaacgca
agtggtgtaaagggttgtgcttattgtggtgggttgggccatcgtatccgggattgcccc
aagttagagcatcagaaaagcatggcgattgcaagttctagaagggattattttggttct
ggtggttacagaggagaaatttga

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

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