KEGG   Theobroma cacao (cacao): 18587852
Entry
18587852          CDS       T02994                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23
  KO
K11855  ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12]
Organism
tcc  Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:tcc01002]
    18587852
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tcc04121]
    18587852
Enzymes [BR:tcc01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     18587852
Peptidases and inhibitors [BR:tcc01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   18587852
Ubiquitin system [BR:tcc04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    18587852
SSDB
Motif
Pfam: UCH UCH_1
Other DBs
NCBI-GeneID: 18587852
NCBI-ProteinID: XP_007011945
Position
9:complement(1572313..1577978)
AA seq 970 aa
MESRMISSSELTTETEKEERFDIGKGTQGSTSSSGGQLFKGKIEFHPARKPFNGFKSCIG
GDFRIETLNPGPDPKRATGMGSGQAGVAGRKADGSDMWENGLDPVLSLRITFRKIGAGLE
NLGNTCFLNSVLQCLTYTEPLAAYLQSGKHQNSCRIAGFCALCAIQKHVSRALQSTGRIL
APNDLVSNLRCISRNFRNSRQEDAHEYMVHLLESMHKCCLPSGVPSESPSAYEKSLVHKI
FGGRLRSQVKCMQCAYCSNTFDPFLDLSLEIAKADSLLKALKNFTAAELLDGGEKQYQCQ
HCKHKVRAIKQLTVYKAPHVLTIHLKRFRAHDFGQKIDRKVEFGPTLDMKPFVSGPNEGD
LKYTLYGVLVHCGWSTHSGHYYCFVRTSSGMWYSLDDNRVFQVSERTVLEQKAYMLFYVR
DRRNIAPRKPVDILQRDNSRANVNGKSLFNQNLKDEVHTGSVENKLCAAGNSAIMNKKDN
VNGGLSKDTSMKQVPSQRNNVHLMAESSVLKKESVFPSSNGSLLKDQSQATVSNPIHGEN
LQLSSHSVVDNVDSSNIENSTVTIGAKDSDCNERGNSKRDFGVPMTMSPNCGGPQNLATD
KLATREPSQKINLSSNIEVSSTVTLEDCINKAVKKVPGEAPSMSTTDETSKNVDPIGSPN
KPNCESSQVEDASNNSTSDKSLNKRGDDGRQNIIFESPWSMPNGCLKKGALDYAPCRNSK
KKHLKLRRKNMHIGLRFKIFRPSLHMRSKKKHKRSKKRTLNAHVLGKTILSDEDLFPEDL
GPSTSEKSSTITLGLIYRGRKKAANDIDMKNVSNSASSFVNTIDGEFKERIYQSGTVLAT
DQQAERSSGSVSEANWRNSREADSLKDSKMVASPHVLTQSLGETTVARWDDVDINSSSQT
IEASGLESVKIGYVLDEWDEEYDRGKRKKIRHNKQHFGGPNLFQQVATKKTQVKKAKFDR
LSSGNRPLRI
NT seq 2913 nt   +upstreamnt  +downstreamnt
atggaatcaagaatgataagtagctcagaattgaccacggaaacagagaaagaagaacgt
tttgatattggaaaggggacacagggttctacttcttctagtggtggtcagctctttaaa
ggaaagattgagttccatccagcaaggaagcccttcaatgggtttaaaagttgcatcggt
ggggattttagaatcgagacgctaaaccccgggccggatccgaagcgggcgaccgggatg
gggtctggtcaagcgggtgttgcaggaaggaaggctgatgggtcggatatgtgggagaat
gggttggatccagttctcagtttgaggatcacttttcgtaaaatcggtgctggtttggag
aatcttggaaacacttgttttctaaattcggtattgcaatgcctgacatacacagagcct
ttagcagcttacctacaaagtggcaagcatcaaaattcttgccgcattgctggattttgt
gccttatgtgctatccagaaacatgttagccgtgctcttcaatcaactgggagaatattg
gctccaaatgatctggtctcaaacctacgatgcatatctcggaacttccgcaattctcga
caggaggatgcacatgagtacatggtacacctactggaatccatgcacaagtgctgctta
ccttcaggagtaccaagtgaatctcctagtgcttatgagaagagtttggtgcacaagatc
tttggtggtcgccttcgtagtcaggtgaaatgcatgcagtgtgcttactgctccaataca
tttgatcccttcctagatttaagtcttgaaatagctaaggccgattccttgcttaaagca
cttaaaaacttcactgctgcggagcttttggatggaggggagaagcagtatcaatgccaa
cactgcaagcataaagttagggcaataaaacagctcacagtttacaaggcacctcatgta
ctcaccatccatctaaagagatttcgtgcacatgattttgggcaaaagattgaccggaaa
gttgaatttggtccaaccttagacatgaagccttttgtcagtggtcccaatgaaggagat
ttgaagtacactctttatggcgttctggttcattgtggatggagcactcattctggccac
tactactgttttgttcgcacatcaagtggcatgtggtactcccttgatgacaacagggtt
ttccaggtcagtgagaggactgttttggagcagaaggcttacatgttattttatgttcgt
gacagaagaaatattgctccaaggaaacctgttgatattcttcagagagataactcaagg
gcaaatgtgaatggaaagtctctgtttaatcaaaatcttaaggatgaggtgcacactggt
tcagttgagaataagttatgtgctgcaggcaattctgctattatgaataaaaaggataat
gttaatggtggcttatcaaaggacacaagcatgaagcaagtgccatctcagcgaaacaat
gtgcacctaatggcagaaagctcagtgcttaaaaaggagtccgtttttccctcttccaat
gggtcattattgaaggatcagtcacaagcaactgtttcaaaccctattcatggtgaaaat
ttgcaactatcatcgcattctgtagttgacaatgttgacagttctaatattgaaaattca
actgtaactatcggtgccaaagatagtgactgcaatgagaggggaaattctaaaagagat
tttggagtccctatgaccatgtcacccaactgtggtggtccccagaacttggccactgat
aagcttgcgactagagagccatcgcagaagattaatctttcttcaaacattgaggtttca
agtactgttacgttagaagattgtattaataaagcagtgaagaaagttcctggtgaagct
ccatctatgagtactactgatgagacatctaagaatgttgaccccattggatctccaaat
aagccaaactgtgagagtagtcaggttgaagatgcttccaacaacagtaccagtgataag
tcactgaacaagaggggagatgatggtagacaaaatattattttcgaatccccttggagc
atgccaaatggatgtttgaagaagggagctcttgattatgcaccctgtagaaattcaaag
aagaagcatctgaagcttcggcgtaaaaacatgcatattggcctaagatttaaaattttc
aggccatccctacacatgcgcagcaagaagaaacataaaaggagcaagaaacgcacatta
aacgcccatgttcttggtaaaacaattttgtcggatgaggatttgtttcctgaagatctg
gggccatctacatctgagaaatccagcacaatcactttaggtttgatttatcgtgggagg
aaaaaggcagccaatgatattgatatgaaaaatgttagcaatagtgccagttccttcgtc
aatactatagatggagaatttaaagagaggatttatcagagcggtacggttcttgcaact
gatcaacaggcagaaaggagttctggctcagtctcagaagcaaactggcgtaactctagg
gaagctgattctttgaaagatagcaaaatggttgcatctccgcatgtgcttacccaaagt
ctgggggagacaactgttgcaagatgggatgatgtggatattaactcatcctctcagacc
atagaagcaagtggtctggaaagtgtcaaaatcggttacgttctggatgaatgggatgaa
gaatatgatcggggtaagaggaagaagataaggcacaataagcagcactttggaggtcca
aatcttttccagcaagttgccaccaagaaaacacaggtaaagaaggctaagtttgaccgt
cttagctctggaaaccgaccattaaggatatga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (39)   

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