KEGG   Theobroma cacao (cacao): 18594973
Entry
18594973          CDS       T02994                                 
Name
(RefSeq) nuclear-pore anchor
  KO
K09291  nucleoprotein TPR
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    18594973
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tcc03019]
    18594973
Messenger RNA biogenesis [BR:tcc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     18594973
SSDB
Motif
Pfam: TPR_MLP1_2
Other DBs
NCBI-GeneID: 18594973
NCBI-ProteinID: XP_017980192
Position
7:20229793..20265515
AA seq 2091 aa
MPLFISEEELSQLSNDVATVAERADAYIREIYGELETAKAKADTAAITAEQTCSLLEQKF
LSISGELSDLQSQNAQLQSCLDERLADLAQSQAQKHQLHLQSIGKDGEIERLTIEVSELH
KSRRQLLEMIEQKDSEIADKNAVIKTYLDKIVNLTDNAAHKEARISETEAELVRAQATCT
RLSQGKELIERHNVWLNEELTAKVDDLVKFRRTQSELEADMSAKLADVERQYNESSSSLN
WHKERMRELEIKLTSLQEDLCSSKEVATSNEERFSAELSTANKLVELYKESSEEWSKKAG
ELEGVIKALEMRLIQVENNYKDRLEKEVSARKQFEKETADLKEKLEKCESEIEAARKANE
LNLLPLGNFTTATWIDSFDANDMVEDNRALVPKIPVGVSGTALAASLLRDGWSLAKMYAK
YQEAVDALRHERLGRKESESTLQRVLCELEEKAAFIMDERAEYEKMREAYSMINQKLQNS
TSERSQLEKMIQELKADLRRHERENSLAQKEIADLQKQVTVLLKECRDIQLRCGPVEHDF
SGDCTIVAAADRSVEPDADRVISELTFKDINGLVERNVQLRSLVRDLSDQIESKEMEFKE
KLEMELKKQTDEAASKVAVVLQRAEEQGHMIESLHASVAMYKKLYEEEHKLHLSYSPAIE
AAPDAGKKDFLLLLEGSQQEASKKAQEKVAQRVRCLEEDQSKARGEIISLRSERDKLALE
ANFAREKLESVMKEAEHQRDEINGVLARNVEFSQLIVDYQRKLRESSESLNAAEEHSRKL
IMEVSVLKHEKEMLANAEKRACDEVCSLSARVHRLQASLDTIQSAEEVREEARALDRRRQ
EEYVIQIEKEWAEAKKQLQEERDNVRTLTSGREQTLKDAMKQVEEIGKELANALHACAAA
EARAAISEARLSDLEKKLKSSDVKILEIDGGTVPSSVSRNEVVELPMTSEEIETLKEEAK
ANRDHMLQYKNIAQINEAALKQMELTHESFKNEAEKLKRSLEAELGSLRERVSELENESS
LKSEEVAFATAGKLEALSSASAEITSLKEETAVKSSQIVALEIQISSMKENLEKEHEKWR
AAQANYERQVILQSETIQELTRTSQALALLQGEASELRKSADAHKSENAELKAKWEVEKS
ILEESRNKAEKKYDELNEQNKLLHSRIEALHIQLAEKDRGSSVILSRSAVQDPLGDSGLQ
NVVNYLRRTKEIAETEISLLKQEKLRLQSQIENALKAAETAQATLNAERANIRAALMTEE
EIKSLQHQVREMNLLRESNMQLREENKHNFEECQNLREAAQKNRIESETLESQLMKRQIE
LEASKKEIEIYRTERDCLEKRVSELLERFKNIDVEDYDRLKNDAQHKEEILKEKDAQIDE
IMNLLSKKQDTISKLECDLATSKLELNEKDKKLNDILLLEANLKSDMEKQRKLVLQYKRR
AESLTKEKEQISKENQALSKLLEELKQGRRSISDTTGDQVMKEKEEKDTRIQSLEKTVER
TREELKKEKDEHQNEKAKRIKCERTIMEAVRKTEKGKATVLSELEKYQQALKRLSEELDK
LKHAEGNLPEGTSVVQLLSGTISDDHASPYLSAAEDFERVALSILNELGTGSGDVPLVDP
SVSTSSGTVPHHDPIIASSTAPATSHHQPAKALEERRSILPKTNIETRKTGRKLVRPRFV
KAEEPQGYVEMSEATSLDGDAQGTLAQQNQPVRKRLASAASELCEDLPVPGETSTDVAVP
VLKKPRGSDSPPEAAEGQAAALSENLGCTEVTEEAYDTVGDVAQGSNEEVVDVEKEEAET
MEEKSDEPKQPQLDGKNEVELLENKNNMLDEMLDRPSGTEMAVDDESKNLAEQDSQQLLL
ETESEREEGELVPEVVAEIEGGADVHNGMGCSEIGDCQQELVPLASPSRVDDEALFTAAV
EGDNSPDVNDEKNNEGDVAEEIVAEGFDKLNDGNHQTAVETDQMPEAATGTAEPTSVSVQ
PDAEVTKPASTSVTPETEVSKPASTSVPPDTEVSKHIGSSSAPEAEDVKQTSPVGATSTL
VNLQERARERAMLRQAGVLPSSSRGRGRPAMRGRVARGRSGRGRGQNSEKQ
NT seq 6276 nt   +upstreamnt  +downstreamnt
atgcccctcttcatctccgaggaggagctgtcgcagctctcgaacgatgtcgcgacggta
gcggagagggcggacgcctacataagggagatttacggagagctggagacggcgaaggcg
aaggctgataccgccgccatcactgctgagcaaacctgttctcttctggagcagaagttc
ctctccatctccggagagttgtcggaccttcagtcccagaacgcacagcttcaatcctgt
ctggatgaaagactcgccgacctcgcccagtcacaggctcagaagcaccagctccacctc
caatccattggaaaagacggggagattgagaggttgacaattgaggtgtccgagctacat
aagtcaaggaggcagttgttggagatgattgagcagaaagattcggagattgctgacaag
aacgctgttattaagacctatcttgataagattgttaacttgacggacaatgctgcccac
aaggaggctcgaataagtgaaactgaggctgagttggtacgagcacaggctacttgcact
cgcctttcacaggggaaagagcttattgagaggcacaatgtgtggcttaatgaggagttg
acagccaaagttgatgatcttgtcaagtttcgtagaacacagtctgaacttgaagctgat
atgtctgctaagcttgctgatgttgagaggcaatacaatgaatcctccagctccttaaat
tggcacaaagaaagaatgagggaactagaaattaagctaacatctttacaggaggatttg
tgctcgtcgaaagaggttgctacatccaatgaggagcgattttctgctgaactatcaact
gcaaataagcttgttgagctatataaagaaagttctgaggaatggtccaaaaaggccggg
gagcttgagggagttataaaagctttggagatgcgcctcattcaagttgaaaataattac
aaagataggcttgagaaagaagtatctgccaggaaacaatttgagaaggagactgcagat
ttaaaagagaaacttgagaagtgcgaatctgaaattgaagctgctaggaaagcgaatgag
ttgaatctacttccacttggaaatttcacaacagcaacatggatagattcatttgatgct
aatgacatggttgaggataatcgtgcgcttgttcctaagattccagtcggggtttcggga
acagcactagctgcttctcttctccgtgatggctggagtctggccaaaatgtatgcaaag
taccaagaggctgttgatgctcttcgacatgagcgattgggaaggaaggaatctgaatca
acattgcaacgggtactatgtgaactagaagagaaagcagcattcattatggatgaaaga
gcggaatatgagaaaatgcgtgaggcatactctatgattaaccagaaattgcagaattct
acatcagaacgctcacagctagagaaaatgatacaggaattaaaggctgatttgaggagg
catgaacgagagaatagtctggctcagaaggagattgctgaccttcaaaagcaggtgaca
gttctccttaaggaatgccgtgacatacaattacgttgtggacctgttgagcatgatttt
tctggtgattgtacaattgttgctgctgctgatagaagtgtggagcctgatgctgacaga
gttatttcagaattgacgtttaaggatataaatggattagttgagcggaatgtccaactt
aggagccttgtgcgtgatctttctgaccagatcgagagtaaggagatggagttcaaggaa
aagctggaaatggagctcaagaaacaaactgatgaagctgcttctaaagttgcggtagtg
ttacaaagagcagaagagcagggacacatgattgaatcactgcatgcctctgttgcaatg
tacaaaaagttatatgaagaggaacataagcttcatctgtcttattcccctgcaatagaa
gcagccccagatgctggaaagaaggacttcttgcttcttctggaagggtcccagcaggaa
gctagtaagaaagcgcaagaaaaagttgctcaacgggtgagatgccttgaagaggatcaa
tctaaggccaggggtgagattatatctttacgatcagagcgtgacaagttggctcttgaa
gcgaattttgctagagaaaaacttgaaagtgtcatgaaagaagctgagcatcagagggat
gaaatcaatggcgttctggcaagaaatgtcgaattctcgcagttgattgttgactaccaa
aggaagctacgtgaaagttccgaatctttaaacgcagctgaggagcattctcggaagtta
attatggaggtgtctgtattgaaacatgaaaaagagatgttagcaaatgctgaaaagaga
gcatgtgatgaagtttgtagcttgtcagcgagagttcatcgtctgcaggctagtttggat
actattcagagtgcagaggaagttcgtgaggaagcaagagctttggatagaaggagacaa
gaggagtatgtaatacaaatagagaaagaatgggctgaagctaagaaacaactgcaagaa
gagagggataatgttcgtacgctaacgtctggccgtgagcagactctgaaagatgctatg
aaacaagttgaagaaataggaaaagaactggctaatgcgttgcatgcttgtgcagctgct
gaggcaagggctgcgatttctgaggccagactctctgatttggagaaaaagcttaaatct
tctgatgttaagattttggagatagatggtggtactgtgccatcctctgtttcaagaaat
gaggttgtagaactgccaatgacaagtgaagagatagagacactaaaggaggaagcaaag
gctaacagggatcacatgctgcagtataagaacatagcacaaattaatgaagctgcattg
aagcaaatggaactcacacatgaaagtttcaagaatgaggccgaaaagttaaagagatct
ttagaagctgagcttggttcacttagagaaagggtttctgaacttgagaatgaatcttct
ttgaaatcagaggaagtagcttttgcgactgcaggaaagctagaggctctttcatctgca
tcagcagaaattacaagtttaaaggaggaaactgcagttaaaagttctcaaattgtggca
ttggagattcaaatttcttctatgaaagagaacctggagaaggagcatgaaaagtggcgt
gcagctcaagctaattatgaaagacaggttattctacaatcagaaaccattcaggagctg
accagaacatcacaagcattggctttactgcagggggaggcatctgagttgcgtaaatcg
gcagatgcacataaaagtgaaaatgctgaacttaaggctaagtgggaggtggagaaatca
atccttgaggaatcaagaaataaagctgagaagaaatatgatgaacttaatgaacagaac
aaattattgcacagtaggattgaggctttgcacattcagttggctgagaaagatcgtggt
tcttctgtaattttgtctcgaagcgctgttcaagatccacttggtgattctggtttgcag
aatgtggttaattacctccgacggacgaaagaaatagcagaaacggagatttctttgttg
aagcaggagaagttacggttgcaatcacaaattgagaatgctcttaaggcagcagaaact
gcccaagccacacttaatgctgagcgtgccaatataagagccgcattgatgacagaggaa
gagatcaagtctttacaacatcaggttagggaaatgaatttactccgtgaaagcaacatg
cagcttagagaagagaacaagcacaattttgaggaatgccagaatttacgcgaggcagct
caaaaaaataggattgaatctgaaactctagagagccagctgatgaagagacaaattgag
cttgaagcttctaaaaaagaaattgaaatctatcggacagagagagattgtttggaaaag
agggtctctgagttacttgagagatttaaaaacattgatgtggaagactatgatcgcctg
aaaaatgatgctcaacataaagaggaaatattgaaagagaaggatgctcagatagatgaa
atcatgaaccttctttctaagaagcaggacacaatatcaaaattggaatgtgatcttgcg
accagcaagttggaactcaatgagaaggataaaaagttaaatgatattttgctattagag
gctaatctaaagtcggacatggagaagcagaggaagcttgtccttcagtataagaggaga
gctgagagtttaacaaaagaaaaagagcaaataagcaaagaaaatcaagccctttcgaaa
ctgttggaggaattgaaacaaggtagaaggtccatcagtgatacgactggtgatcaagtc
atgaaggaaaaagaggagaaagacactagaatacagagtctggaaaaaacggttgagagg
acaagagaagagttgaagaaagaaaaggatgaacatcagaatgagaaagcaaagcgtata
aaatgtgaacggactatcatggaagctgttaggaaaactgaaaagggaaaagcaaccgtt
ttaagtgagcttgagaagtatcagcaggctttgaagcgcctctcagaagaactagacaag
ctcaaacatgctgaaggcaatcttccagagggtacctctgtggttcagcttctttctggc
accatctctgatgatcatgcttctccatatttatctgctgcagaggattttgaaagagta
gcactttcaattctgaatgagcttggaactggctctggagacgttcctttggttgaccct
tctgtatccacctcttcaggtacagtacctcatcatgatcccattattgcatcctcaact
gctcctgcaacaagccaccatcaaccagctaaagcattagaagagaggagatctatttta
cctaaaaccaatattgaaactcgtaaaactgggaggaagcttgtccgcccacgttttgtc
aaagccgaagagccacaaggttatgtggagatgtcagaagctacatctcttgatggtgat
gcccaaggaactcttgctcaacaaaatcaaccagttcgcaaacgtctagcttcagctgct
tctgagttgtgcgaggatttaccagttccaggggagacgagtactgacgtggctgtacca
gttctcaagaaacctagaggttcagattccccaccagaggctgctgaaggtcaagctgct
gctctttcagaaaatcttggttgcacagaagtaactgaagaagcgtatgataccgttggt
gatgtagctcaaggttcgaatgaggaggttgttgatgtggagaaggaagaggctgaaaca
atggaggagaaatctgatgaaccaaaacaaccccaattagatggcaaaaatgaggttgaa
ttgctggaaaataaaaacaatatgttagatgagatgttggataggccaagtggaactgag
atggcggttgacgatgaatcaaagaatctggctgagcaagatagccaacagctcttgctt
gaaactgagagtgagagggaagaaggagaactggtccctgaggtagtagcagaaattgaa
ggaggtgctgatgtgcacaatgggatgggatgctctgaaattggggactgtcagcaagag
ctagttcctttggcttcaccttctagggttgatgatgaagcactatttactgcagcagta
gaaggtgataactctcctgacgtaaatgatgagaagaataatgaaggtgatgtagctgaa
gagattgttgctgaaggatttgataagttaaatgacggtaatcaccagactgcagtggag
acggatcagatgcctgaagctgccactgggactgctgagcctacctcagtaagtgttcaa
ccagacgccgaggtcacaaagcctgcttctacaagtgttacaccagagaccgaggtctca
aagcctgcttcaacaagtgttccgcctgacactgaggtctcaaagcacattggttcaagt
tctgcaccagaagcagaagatgtaaaacaaacatctcctgtaggtgcaacctcaactttg
gtaaatctacaagagcgagcgagagagagagccatgctaaggcaggcaggagtgcttccc
tcctcaagtagaggtcggggaagaccagcaatgcgcggtcgtgttgcccggggacgcagt
gggcgtgggcgtggacaaaattccgaaaaacagtga

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