KEGG   Theobroma cacao (cacao): 18595772
Entry
18595772          CDS       T02994                                 
Name
(RefSeq) periodic tryptophan protein 2 homolog
  KO
K14558  periodic tryptophan protein 2
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    18595772
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tcc03009]
    18595772
Ribosome biogenesis [BR:tcc03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    18595772
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 Utp12 NBCH_WD40 RMC1_N WD40_like BBS2_Mid WDR54 Nup160 Utp21 DUF4485
Other DBs
NCBI-GeneID: 18595772
NCBI-ProteinID: XP_007023928
Position
6:complement(13033258..13037991)
AA seq 887 aa
MNYRFQNLLGAPYRGGNAVITQNTNLISPVGNRVSVTDLVKSQTVTLPDQSSSNIRRIAA
SPDGVFLLTIDDNNRCLFINIPRRGVLHRITFKHPVSAVKFNPNGKYVAVAAGKLLQIWK
SPGFKREVFGFELVRTFADCNDKILAIDWDNESKYLIVGTKDLTVRLFFVDKVKGSYKKP
FSFLGHKDSVVGCFFGVDKKSNRVNKVYTIARDGFIFSWSYSGNDAKINDFRDEVLEDDE
PPSPGTPEKDGEGIVKKRKDFDGKESGFGEDEDYLSGGAWELTKHCFMQAPAKLTACDYH
RGLDLVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNDLGNWLTFGCAELGQLLV
WEWRSESYILKQQGHYFDVNTLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNA
VTALHFMANNHCLLSASLDGTVRAWDLLRYRNFRTFTTPSSRQFVSLAADQSGEVICAGT
QDSFEIFVWSMKTGRLLDVLSGHEGPVHGLMFSPTNAILASSSWDKTVRLWDVFEGKGTV
ETFPHAHDVLTVTYRPDGKQLACSTLDGQIHFWDPIDGFLMYTIEGRRDIAGGRLMTDRR
SAANSSSGKCFTSLCYSADGSYILAGGSNRFICMYDVADQVLLRRFQITHNLSLDGVLDF
LNSKNMTAAGPLDLIDDDNSDTEEGIDKQTRGNMGYNLPGSMPNHGRPVVRTKCLKIAPT
GRSFSAATTEGVLVYSIDESFIFDPTDLDIDVTPEAIDAALNEDQPSRALILSLRLNEDT
LIKKCIFSVSLVDVPAVASSIPCRYLQRLIEALVDLLERCPHLEFVLCWCQELCQVHGNS
IQQNSRNLLPALKSLQKAITIIHQDLADTCASNEYMLRYLCSVSIKK
NT seq 2664 nt   +upstreamnt  +downstreamnt
atgaattaccgtttccagaacctcctaggcgccccttaccgcggcggcaacgccgtcata
acacaaaacaccaacctaatctctcccgtaggcaaccgcgtctccgtcaccgacctcgtc
aaatcccaaaccgtaacccttcctgatcagtcatccagcaacatccgccgaattgctgcc
tcacctgacggcgttttcctcctcaccatcgatgacaacaaccgttgcctcttcatcaac
atcccgcggcgcggggtgttgcaccgcataacttttaagcatcccgtaagtgccgtcaag
tttaaccccaatgggaaatacgtagccgtggcagcaggcaaattgttgcaaatttggaaa
tctcctgggtttaaaagggaagtttttgggtttgaattggttagaacttttgctgattgc
aatgacaagatattggcaattgattgggataatgaatcaaaatatttgattgttgggact
aaagatttgactgtgcggttgttttttgtggataaagtaaagggtagttataaaaaaccg
ttttcgtttctggggcataaagattcagttgttggctgcttctttggtgttgataagaag
agtaatagggttaataaggtgtacacaattgctcgtgatggttttatttttagttggagt
tatagtggcaatgatgctaaaattaatgactttagagatgaagttctggaggatgacgag
ccaccttctccaggaacaccagagaaggatggggaagggattgtgaagaaaaggaaggat
tttgatggtaaagaaagtggctttggtgaagatgaggattatttgagtggaggggcatgg
gagttgacaaaacattgtttcatgcaggctccggcaaaattgactgcttgtgattatcac
agggggcttgatcttgttgtggtgggattctctaatggggtttttggattatatcagatg
ccggattttgtgtgcatccatttattatcgatatcgagggagaagattacaacagctgtt
ttcaatgaccttgggaattggttgacatttggttgtgcagagttggggcagttattggtg
tgggagtggcggtccgagagttatatactgaagcagcagggacattactttgatgtgaat
actctggcttattcgccagattcacaactattggctactggagctgatgataacaaagtg
aaggtatggactgtttcctcaggcttttgctttgtaaccttcaccgagcacactaatgca
gtgactgcactccattttatggctaataaccattgcctcttaagtgcatctctggatggt
actgttcgtgcatgggatctgttgcgctatcgaaattttagaacatttactaccccttct
tctaggcagtttgtttctttggcagctgatcaaagtggtgaagtgatttgtgcaggaact
caagattcatttgagatttttgtttggtcaatgaagacgggtcgcttattggatgtactt
agtggtcatgaaggtcctgttcacggattgatgttttctccgacaaatgcaatattagct
tcatcatcatgggacaaaactgttcggttgtgggatgtatttgaaggaaaaggcactgta
gaaacgtttccacatgcacacgatgttctgacagttacatatcgtccagatggaaagcaa
ttggcttgcagcacattagatggacagattcatttttgggaccctattgatggcttttta
atgtacacgattgagggtcgtagggatatagctggaggacgtctcatgaccgatcgaaga
tcagcagctaactcaagttcaggaaagtgcttcacatccttgtgttattctgctgatggg
agttacatcttagctggaggaagtaacagattcatctgtatgtatgatgttgctgatcag
gttctacttcgacggtttcaaataactcacaacctctctttggatggagttcttgacttt
ttgaactcaaagaatatgacagcagctggcccattggatttgattgatgatgataacagt
gatacagaagaaggtattgacaaacaaacccgaggaaatatgggatataatcttccagga
tccatgcctaatcatggaaggcctgttgtccgaacaaagtgcctaaaaattgcacccacg
ggacgaagtttttcagcagcaacaaccgagggtgttcttgtttattcaattgatgaatcc
tttatctttgatcccacagatcttgatatagatgttacgccagaggccattgatgcagca
cttaatgaagatcagccaagcagagctttaattcttagcttgcgtttgaacgaggataca
ctaattaaaaagtgtattttctctgtcagtctagttgatgttccagcagttgcttcatca
atcccttgcagatatttgcaaaggttaatagaggcattagtggaccttctggaaaggtgc
ccacacttagagttcgtgctttgctggtgtcaggaactctgtcaagttcatggtaactcc
attcagcagaattccagaaatcttctacctgctttaaaatctttacagaaggcaatcacc
ataattcaccaggatttggcagatacatgtgcttccaatgaatatatgcttcgatactta
tgctctgttagcatcaagaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (34)   

Download RDF
DBGET integrated database retrieval system