KEGG   Theobroma cacao (cacao): 18596942
Entry
18596942          CDS       T02994                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog 2
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    18596942
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tcc04131]
    18596942
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tcc04147]
    18596942
Membrane trafficking [BR:tcc04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    18596942
Exosome [BR:tcc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   18596942
  Exosomal proteins of other body fluids (saliva and urine)
   18596942
  Exosomal proteins of colorectal cancer cells
   18596942
  Exosomal proteins of bladder cancer cells
   18596942
SSDB
Motif
Pfam: VPS28 GDH_C DAHL RNase_H
Other DBs
NCBI-GeneID: 18596942
NCBI-ProteinID: XP_017978758
Position
6:24343192..24344900
AA seq 209 aa
MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIITSSEYETECQKLIAHFKTLA
STLKDTVPSIERFADTYKMDCPAAINRLVTSGVPATVEHRAAAAASATTSAAIVAECVQN
FITAMDSLKLNMVAVDQVHPLLSDLSASLNKLSILPPDFEGKTKMKEWISRLSKMGAADE
LTEQQARQLHFDLESSYNSFMAALPNAGT
NT seq 630 nt   +upstreamnt  +downstreamnt
atggaggttaagctatggaacgacaagcgcgagagagaaatgtacgagaattttgctgag
ctttatgccattatcaaagcaacagagaagcttgagaaggcttatgtgagggatatcatt
acatcatctgaatatgaaactgagtgccaaaagcttattgcccatttcaaaaccttagct
tccacgctgaaagacacggtccctagcattgaacgctttgctgatacgtataaaatggac
tgcccggctgctataaatcggctggtgacctctggggtgcctgccactgtggagcaccgg
gctgctgcagctgcttctgctactacctcagctgccattgtggctgaatgtgtgcagaat
tttattactgccatggattcattgaaactcaatatggtggcggttgatcaagtgcatcct
ctcttatctgacctctcagcatcacttaataagcttagtattttgccccctgatttcgag
gggaagacaaagatgaaggaatggatttcaaggttgtcgaagatgggggcagcagatgag
ttaacagagcagcaagctaggcagctccactttgacttggaatcttcatataattcattt
atggcagctttgcctaatgctggtacttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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