KEGG   Theobroma cacao (cacao): 18599493
Entry
18599493          CDS       T02994                                 
Name
(RefSeq) protein EXPORTIN 1A
  KO
K14290  exportin-1
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc03008  Ribosome biogenesis in eukaryotes
tcc03013  Nucleocytoplasmic transport
tcc03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    18599493
   03008 Ribosome biogenesis in eukaryotes
    18599493
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    18599493
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tcc03019]
    18599493
   03009 Ribosome biogenesis [BR:tcc03009]
    18599493
   03016 Transfer RNA biogenesis [BR:tcc03016]
    18599493
   03036 Chromosome and associated proteins [BR:tcc03036]
    18599493
Messenger RNA biogenesis [BR:tcc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     18599493
Ribosome biogenesis [BR:tcc03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    18599493
  Pre-60S particles
    18599493
Transfer RNA biogenesis [BR:tcc03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    18599493
Chromosome and associated proteins [BR:tcc03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     18599493
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N DUF3385 Gpr1_Fun34_YaaH
Other DBs
NCBI-GeneID: 18599493
NCBI-ProteinID: XP_017977054
UniProt: A0A061F044
Position
5:complement(31847007..31859953)
AA seq 1076 aa
MAAERLRDLSQPIDVSLLDATVAAFYGTGSKEERAHADQILRDLQNNPDMWLQVVHILQH
TKSLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFRAERLYVNK
LNIILVQILKHDWPARWQSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQ
KIKELKQSLNSEFQLIHELCLYVLSVSQRTELIRATLSTLHAFLSWIPLGYIFESTLLET
LLNFFPVPSYRNLTLQCLTEIAALNFGDYYDVQYIKMYNIFMVQFQTILPPTTNIPEAYA
HGSSEEQAFIQNLALFFTSFYKFHIRVLETAQENISALLVGLEYLINISYVDDTEVFKVC
LDYWNSLVLGLFDAHHNMDNPAVTANMMGLQVPLLPGMVDGLGAQLLQRRQLYAGTMSKL
RMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEKQM
LKKLSKQLSGEDWTWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEITKGKDN
KAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCK
RKFVIVQVGESEPFVSELLSALATTVADLEPHQIHTFYESVGHMIQAESDPHKRDEYLQR
LMELPNQKWVEIIGQARQSVDFLKDQDVIRTVLNILQTNTSVASSLGTYFLTQISLIFLD
MLNVYRMYSELISSSIAEGGPFASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQF
VPPMMDPVLGDYARNLPDARESEVLSLFATIINKYKAAMIDDVPRIFEAVFQCTLEMITK
NFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAETGLNL
LLEMLKNFQASEFCNQFYRTYFLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLVESGL
LTEPLWDAATVPYPYPNNGMFVREYTIKLLSTSFPNMTAAEVTQFVNGLFESRNDLSTFK
NHIRDFLVQSKEFSAQDNKDLYAEEAAVQRERERQRMLSIPGLIAPNEIQDEMLDS
NT seq 3231 nt   +upstreamnt  +downstreamnt
atggcggctgagaggcttagggatttgagtcagccgattgatgtctccttgcttgacgcc
accgtcgcggccttttacggcaccggatctaaagaagagagagctcatgcagatcagatc
ttgcgagatcttcaaaataatccggatatgtggcttcaagttgtgcacatcctgcagcac
acaaagagccttaataccaagttctttgccttgcaggttcttgaaggtgttatcaagtat
agatggaatgctttgcctgtcgagcagcgagatggaatgaaaaactacatttctgaagtc
attgtacagttgtcaagcaatgaggcctcctttcgagcagagaggctgtatgtcaacaag
ctgaatattatattggttcagatcttaaagcatgattggccagctagatggcaaagcttc
attcctgatcttgttgcagctgcaaaaactagcgaaacaatttgcgaaaactgcatggca
atactgaaacttctaagtgaagaagtttttgacttctcaagaggtgaaatgactcaacaa
aagatcaaagagcttaaacaatcactaaacagtgagtttcaactcattcatgagttatgc
ttatacgtactatcagtttctcagagaacagagcttatacgggcgacgctatctaccttg
catgcatttctatcgtggattcctctgggctatatttttgaatcgacattgctggaaaca
ctcctaaattttttccctgtgccatcatatcggaatctcaccctccaatgtctaacagag
attgctgccttaaattttggggactactacgatgtgcaatatattaagatgtacaatata
ttcatggtccagtttcagaccattctcccaccaactacgaacatccctgaggcttatgcg
cacggaagcagtgaggagcaggcattcattcagaatttggcactgttcttcacttcattc
tacaagtttcacattcgggtgctagagactgcacaagagaatatttctgccctgttagtg
ggtctggaataccttattaacatttcatacgtggatgatacagaagtctttaaggtttgc
ttggactattggaactccttggtcttggggctttttgatgcacatcataacatggataat
cctgcggtaactgcaaacatgatgggactgcaggtgcctttgcttcctggtatggtcgat
ggtcttggtgcccagcttctgcaacggcgacaactttatgctggtacaatgtcgaagttg
agaatgctcatgatttgccgtatggctaagcctgaggaggttctgatagtggaagatgag
aatgggaatattgttcgagagacgatgaaagacaatgatgttcttgttcagtataagatt
atgagggagacgttgatttatttgtctcaccttgatcatgaggatacagaaaagcagatg
ctaaagaaattaagcaagcaattgagtggtgaggattggacttggaacaatttgaacacg
ttatgctgggcaataggatctatttctggttccatgatggaagagcaggaaaacaggttt
ctggtgatggtcattcgtgatttgctgaatttgtgtgaaatcactaaaggaaaagacaat
aaagctgttattgctagtaacattatgtatgttgttggacagtatccaaggtttttaagg
gctcactggaagttcctgaaaactgttgtgaataagttgtttgagttcatgcatgaaact
catccaggagttcaggatatggcctgtgacacattcttgaaaattgttcagaaatgcaag
cgaaaatttgtgattgtgcaggttggagaaagtgaaccatttgtgtctgaacttctatct
gctcttgcaacaacagttgcagatctagagcctcatcagattcatacattttatgaatct
gttggtcatatgattcaagcagaatctgatccccataagagggatgaatacttgcagaga
ttgatggaactccccaaccagaaatgggttgaaattatagggcaggcacgtcaaagtgtt
gacttccttaaagatcaggatgtaataagaactgtgctaaacattttgcagacaaatact
agtgtggccagttctcttggaacatatttcttaacccaaatttctttgatctttctggat
atgcttaatgtatacagaatgtacagtgagcttatatcgagtagtattgcagaaggagga
ccctttgcttcaaaaacgtcctatgtaaaacttctacgatctgttaagagggagactctt
aagcttattgagacatttttggacaaggcagaagatcaaccacaaattgggaaacaattt
gtgcctccaatgatggatccagttcttggtgattatgctaggaatttgcctgatgcaaga
gaatctgaagttttgtcactttttgcgacaataataaacaagtataaagctgcaatgata
gatgatgttccccgtatatttgaagctgttttccagtgcacactggagatgataaccaaa
aattttgaagattatccagaacatcgcctcaagttcttttccttgcttcgtgccattgct
actcattgttttcctgcacttattcggttgtcaagtcagcaactaaagctagttatggat
tcaatcatttgggcattccggcatacagagaggaatatagcagaaactggtctaaatctt
ctattggagatgctgaaaaactttcaggcttctgaattttgtaaccagttctaccgaaca
tactttttgacaattgagcaagaaatatttgcagtcttgacagacacatttcacaaacct
ggcttcaagttgcatgtcttggttttacagcacctgttctgcctggttgagagcggtttg
ttgactgagcccttgtgggatgctgcaacggttccctatccatatccaaataatggaatg
tttgttcgtgaatacacgataaaacttctgagtacatcattccccaacatgactgcagct
gaggtcactcaatttgtgaatggactatttgagtcgagaaatgatttgtccacatttaag
aatcacatacgggacttccttgtgcaatcaaaagaattttcagctcaggacaacaaagat
ctttatgcagaagaggctgctgtacagagggaaagagagcgacaacggatgctttctatc
ccagggctcattgccccgaatgagatacaagatgagatgttggactcatag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (31)   

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