KEGG   Theobroma cacao (cacao): 18601598
Entry
18601598          CDS       T02994                                 
Name
(RefSeq) probable ubiquitin conjugation factor E4
  KO
K10597  ubiquitin conjugation factor E4 B [EC:2.3.2.27]
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc04120  Ubiquitin mediated proteolysis
tcc04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    18601598
   04120 Ubiquitin mediated proteolysis
    18601598
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tcc04121]
    18601598
Enzymes [BR:tcc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     18601598
Ubiquitin system [BR:tcc04121]
 Ubiquitin ligases (E3)
  U-box type E3
   18601598
SSDB
Motif
Pfam: Ufd2P_core U-box
Other DBs
NCBI-GeneID: 18601598
NCBI-ProteinID: XP_007032650
Position
4:complement(16401185..16408254)
AA seq 1042 aa
MATQKPQRTPEEVEDIILRKIFLVTLKENQENSSSDPKVVYLERTAAEILSEGKSLLLSR
DLMERVLIDRLSGDFPNSESPFLYLIGCYRRAHEEIKKISNMKDKTLRSEMEAAAKQAKK
LAASYARIHLGNPEWFSNGNLRDSNLKTGSSLSSNSPLLPLLFAEVSSGVMLDGFGGNEL
GSGVDCPPGFLEEFFKDSDFDTLDQILKGLYEDLRGSVLKVSALGNFQQPLRALLYLAHF
PVCAKSLVNHPWWIPKGVYLNGRVIEMTSILGPFFHVSALPDHTIFKSQPDVGQQCFSEA
STRRQDNSFIKTIMNTLYDGLAEVLLCLLKNTETRESVLEYLAEVINKNASRAHIQVDPI
SCASSGMFVNLSAVMLRLCEPFLDANLTKRDKIDPNYVFYSNRLDLRGLTALHATSEEVS
EWMNKDNPVKTDGTRPHGDGENRLLQSQEATSSGSTLSVKPTSSSGEKAKYPFICECFFM
TARVLNLGLLKAFSDFKHLVQDISRCEDTLATLKAMQGQAPSSQLELDISRLEKEIELYS
QEKFCYEAQILKDGALIQHALSFYRLMVIWLVGLVGGFKMPLPSTCPMEFASMPEHFVED
AMELLIFSSRIPRALDGVLLDDFMNFIIMFMASPQFINNPYLRAKMVEVLNCWMPRGSGS
SATSTLFDGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSH
RNAWKQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNSAEWERRSAQ
ERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQITAPFLLPEMVERVASMLNYFLLQ
LVGPQRKSLSLKDPVKYEFRPKELLEQIVRIYVHLARGDAKNIFPAAISSDGRSYNEQLF
SAAADVLRRIGMDGRIIEDFIELGAKAKAAASEAMDTEAALGDIPDEFLDPIQYTLMKDP
VILPSSRITVDRPVIQRHLLSDSTDPFNRSHLTADMLIPHTELKARIQEFIRSHELKRRG
EGLNMQSSKGTIQPTSGEMLID
NT seq 3129 nt   +upstreamnt  +downstreamnt
atggcaacccaaaaaccccaaagaactccagaagaagttgaggatataatcttaagaaaa
atcttccttgtaacccttaaagaaaaccaagaaaactcttcttctgatccaaaggtagtt
taccttgagaggaccgcagctgagatcttaagtgaaggaaaaagtcttttactttcacgt
gatttaatggaaagggttttaattgatcgtctttctggtgactttcccaattccgaatct
ccttttctttatctcattggttgttatagaagagctcatgaagaaatcaagaagatttcc
aacatgaaagacaaaacgctgcgttctgagatggaggctgctgctaaacaggctaagaag
ttggctgcttcttatgctaggattcatctgggaaatcctgagtggttttctaatgggaat
ttaagggatagtaacttgaaaacgggttcttctttgtcttcgaattcgcctttgttgcca
ttactttttgctgaagtttcaagtggagtaatgcttgatgggtttggagggaatgaattg
ggaagtggggtagactgcccaccagggttcttggaggagttctttaaggattcagatttt
gatactttagaccagattttaaaagggttgtatgaggatttaagagggagtgttttgaaa
gtttcagctttggggaattttcagcaacctttgagggctttgttgtatttggcacatttc
cctgtttgtgctaagagtttggttaatcatccttggtggatacctaaaggggtttacttg
aatggacgtgttattgaaatgactagcattttgggtcccttttttcatgttagtgctttg
cccgatcataccattttcaagagccagcccgatgttggccagcagtgcttctcagaagca
tcaactcgacggcaagataactcattcatcaagactatcatgaatactttatatgacggt
ctggcagaagttcttctgtgtctccttaaaaatactgagacccgtgagagtgtccttgag
tatcttgcagaagtcatcaataaaaatgcatccagggcccatatacaggttgatcctata
tcttgtgctagttctggaatgtttgtcaatctcagtgctgttatgcttcgactttgtgaa
ccgtttttggatgcaaatttaacaaaaagagataagattgacccaaactatgttttttac
agtaatcgtttggatttgagggggctaactgctctgcatgcaacctcagaagaagtttct
gaatggatgaacaaagataatcctgtaaaaactgatgggaccagaccacatggcgatggt
gaaaatcgtctgctgcaatctcaagaagctaccagttctggaagtaccctcagtgtgaag
ccaacctcaagtagtggtgaaaaagctaaatatccatttatttgtgaatgcttctttatg
actgctagggtactcaacttgggcctcctaaaggcattttctgacttcaagcatctagtc
caggacatttcaagatgtgaagatactcttgccaccttaaaagctatgcaaggacaggca
ccttcttcacaactggagctggatatatctaggcttgagaaagaaatagaactatattcg
caggaaaaattttgttatgaggctcaaattttgaaggatggggcgcttattcaacatgca
ctttcattctatcgactaatggtgatttggttagttggcttggttggcggatttaaaatg
cctctaccatctacttgtccaatggaatttgcttctatgccagagcactttgtggaagat
gctatggaactattaatattttcctcccggattccaagagctttggatggggttttactg
gatgactttatgaattttattattatgtttatggcaagtccccaatttatcaacaacccc
tatctcagagcaaaaatggttgaagttttgaactgttggatgccccgtggaagtggttca
tctgccacatctacactatttgacgggcatcaattgtccttggaatatcttgtgaggaat
cttttgaagctttatgttgacattgagttcacaggttctcatacacagttctatgataag
ttcaacattcgccataatattgctgaacttcttgaatacctttggcaagttcctagtcat
cgtaatgcgtggaaacagattgctaaggaagaagaaaagggtgtttatctgaatttcttg
aacttcctgatcaacgatagcatctacctccttgatgaaagtctcaacaaaattcttgaa
ctcaaagagcttgaagctgagatgtcaaattctgcagaatgggagcggaggtcagctcag
gaaaggcaagagagaactcgactattccactcccaggagaacattatacggattgatatg
aagttggctaatgaggatgttagtatgctggcatttacatctgagcagattacagctcct
tttctactccctgagatggttgaaagagtggccagtatgctcaattactttttattgcaa
ctagtgggccctcaaagaaaatctcttagtctgaaagatcctgtaaagtacgaattccgt
ccaaaagaattactcgagcagattgtccgcatatatgttcatctggcaaggggtgacgcc
aaaaacatatttccggcagctatctccagtgatggtcgttcatacaatgaacagttgttt
agtgctgcagcagacgtgcttcggagaattggcatggatgggaggattatagaagatttt
attgaacttggtgcgaaggccaaggctgcagcttctgaggccatggacactgaagctgcc
cttggagatatacccgatgaattccttgatccgattcaatatactttaatgaaggatcca
gtgattttaccatcttcaaggatcacagtagacagacctgtcatccagagacatcttcta
agtgatagtactgacccattcaatcgatcccatcttaccgcggatatgctgattccacac
actgaattgaaggcacgaattcaggagtttattaggtcccatgaattgaagaggcgtgga
gaaggtttaaacatgcagagctccaagggaacaatacaaccaacaagtggggaaatgtta
attgactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

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