KEGG   Theobroma cacao (cacao): 18612132
Entry
18612132          CDS       T02994                                 
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
  KO
K14553  U3 small nucleolar RNA-associated protein 18
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    18612132
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tcc03009]
    18612132
Ribosome biogenesis [BR:tcc03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    18612132
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 Cytochrom_D1
Other DBs
NCBI-GeneID: 18612132
NCBI-ProteinID: XP_007048814
Position
1:complement(9529613..9532055)
AA seq 555 aa
MSLISQNPVSRNRVKAKRDDGPSIHEDNKDIDNGLESDSEVSRLKKRRKEKEKQIEMEQE
KEIKKLENILFGSIYSPVEFGKAGEENAQVVAQDGSTLFFLDRSVNNLELPEESDDEEKN
KERKAVWVDEEEEKTTINIAKVNRLRKLRKEEDESLISGSEYISRLRAQHTKLNPGTEWA
DLDSGIRNDTIYDDELSDEEKGVVAAQGYGNVEVDDDILRTNEDLVVKSNVKLLPGLLEY
SRLVDANAEESSSGPINSVQFHRNAQLLLAAGLDRRVRFFQIDGKRNTKIQSIFLEDCPV
RKASFLPDGSQVIIAGRRKFFYCFDLVKAKIDKIGPLVGREEKSLEVFEVSPDSSTIAFL
GNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCFHK
AVDEGCINGTALCTSPNGRMFAAGSDSGIVNIYNRDEFLGGKRKPIKTIENLTTQVDFMK
FNSDAQILAICSTMKKNSLKLIHVPSFTVYSNWPPPNVNLHYPRCLDFSPGGGFVTVGNA
AGKVLLYKLHHYSHA
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgagtttgatatctcagaatccagtgtctagaaacagagtgaaggctaaaagggatgat
gggccttcaattcatgaagataacaaagatattgataatgggttggaatccgattctgaa
gtttctaggttaaaaaagagaaggaaagaaaaggaaaagcagattgagatggagcaagag
aaagaaatcaaaaagctggagaacattctttttggatccatatattcccctgttgaattt
ggtaaagcaggcgaggaaaatgctcaagttgttgctcaagatggttctactttgttcttt
ttagaccgatcggtgaataatttagaattgcctgaggaaagtgatgatgaagagaagaat
aaggaaaggaaagctgtgtgggtggatgaggaggaggaaaaaacaacaataaacatagct
aaggttaataggttgaggaagttgaggaaggaagaggatgagagtctgatttctggttca
gagtatatttctagattgcgggctcagcacactaagctgaacccagggacagaatgggca
gacctagattcggggataaggaatgatactatttatgatgatgaattatcggatgaagaa
aagggtgttgtagctgctcagggttatggaaatgtcgaagttgatgatgatattctgaga
acaaatgaagatcttgtggtgaagagtaatgttaaattgttgccagggcttcttgagtat
tcgagactagtggatgcaaatgctgaggaatcttccagtggtccaataaattctgtccag
ttccataggaatgctcagttactacttgctgctggactggataggagggtcaggtttttt
cagattgatggtaaacggaataccaaaatacaaagcatctttcttgaagattgtcctgtt
cgaaaggcatctttcttacctgatggttcgcaggtcattatagcagggaggaggaagttc
ttctactgttttgatttagtgaaagcaaaaattgataaaatagggccattggttggcagg
gaggaaaaaagcttggaagtttttgaggtttccccagattctagtacgattgcttttttg
ggaaatgaaggttatatcttgttggtttcaaccaaaacaaaggaactgattggaacactt
aaaatgaatggaactgtccgttctctagcttttgctgatgatgggaagcaattattgagc
tctggtggggatggacaggtctaccactgggacttgagaacaagaacttgcttccataag
gctgttgatgaaggctgcatcaatggtacagctctttgcacttcaccgaatggaagaatg
tttgcagctggttcagacagtgggatagtgaacatttacaacagggacgaattcttggga
ggtaaaagaaaaccgatcaagactattgagaatctaaccacccaagtggattttatgaag
tttaatagtgatgctcaaatactggctatctgttctaccatgaagaaaaacagtttgaag
ctgatacacgtcccatcgtttactgtatactctaattggcctccaccgaatgtgaactta
cattatccccgctgcttggatttcagtcctggtggtggttttgtgactgttggaaatgct
gctggcaaagtgctattatacaagttgcatcattacagtcatgcatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (34)   

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