KEGG   Theobroma cacao (cacao): 18612907
Entry
18612907          CDS       T02994                                 
Name
(RefSeq) CLIP-associated protein
  KO
K16578  CLIP-associating protein 1/2
Organism
tcc  Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tcc03036]
    18612907
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tcc04812]
    18612907
Chromosome and associated proteins [BR:tcc03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Microtubule-associated proteins
     18612907
Cytoskeleton proteins [BR:tcc04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Cytoplasmic linker proteins (CLIPs)
     CLIP-associating proteins
      18612907
SSDB
Motif
Pfam: CLASP_N CEP104-like_TOG XMAP215_CLASP_TOG HEAT HEAT_EZ HEAT_2 Vac14_Fab1_bd Adaptin_N Cnd1 Maestro_HEAT PDS5 MMS19_C Tti2 UTP20_C V-ATPase_H_N Rif1_N Dopey_N SPO22 API5
Other DBs
NCBI-GeneID: 18612907
NCBI-ProteinID: XP_017982212
UniProt: A0A061DMS3
Position
1:complement(20919767..20933706)
AA seq 1442 aa
MEEALELARAKDTKERMAAVERLYQLLEGSRKSLTSSEVTSLVDCCLDLLKDNNFRVSQG
ALQALASAAVLSGDHLKLHFNALVPAVVERLGDAKQPVRDAARRLLLTLMEVSSPTIIVE
RAGSYAWTHKSWRVREEFARTVTSAISLFASTELPLQRAILPPILQMLNDSNPGVREAAI
LCIEEMYTQAGTQFRDELHRHQLPASMVRDINARLEKIEPQVRSSDGMLSGFGAGEIKPA
ILNPKKSSPRAKSSSSSRETSLFGGESDITEKPIDPIKVYSDKELIREFEKIASTLVPEK
DWSIRIAAMQRVEGLVSGGATDYPCFRGLLKQLVGPLSTQLSDRRSSIVKQACHLLSFLS
KELLGDFEACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKAARVLPRIADCAKND
RSSVLRARCVEYALLILEHWPDAPEIQRSADLYEDLIRCCVADAMSEVRSTARMCYRMFT
KTWPDRSRRLFSFFDPVIQRIINEEDGGMHRRHASPSLRDRNIQMPFSSQTSAPSNLPGY
GTSAIVAMDRTSSLSSGTSLSSGLILSQSKPLGKGAERTLESVLHASKQKVSAIESMLRG
LDISEKQRSSSLDLGVDPPSSRDPPFPATVPASNSLTSSLGVESTTSSVGKGSNRNGGMI
MSDIITQIQASKDSGKLSYRSSVATESLPAFPLYSAKRASERQERGSVEENSDIREARRF
INPHVDRQYLDTPYRDVNTKDSQNNYIPNFQRPLLRKHVAGRMSAGRRKSFDDSQLSLGE
MSNYVEGPASLSDALSEGLSPSSDWCARVAAFTYLRSLLQQGPKGIQEVVQNFEKVMKLF
FQHLDDPHHKVAQAALSTLADIIPSCRKPFESYMERILPHVFSRLIDPKELVRQPCSTTL
EIVSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAISSFNKHAMSSEGSGNIGILKLWL
AKLMPLVHDKNTKLKDAAISCIISVYSHFDPTAVLNFILSLSVEEQNSLRRALKQYTPRI
EVDLINYLQNKKERQRAKSSYDPSDVVGTSSEEGYIGVSKKSLLLGRYSAGSLDSEGGRK
WGSTQDSTLIASSIGQATSDETQENLYQNFESSANADALPLKTKELSYIVNSGQSLGSRT
GRVENFESGVNLESLSTPRLEMNGLSRSDSLGAIEGLGHNNETSSDLDLNHLKPAAVKVS
SMPDTGPSIPQILHLICNGNDESPTASKRSALQQLIEISLANDFSIWNKYFNQILTAVLE
VVDDSDSSIRELALSLIVEMLKNQKDAMEDSVEIVIEKLLHVTKDIVPKVSSEAEHCLNT
VLSQYDPFRCLSVIVPLLVTEDEKTLVICINCLTKLVGRLSQEELMVQLPSFLPALFEAF
GNQSADVRKTVVFCLVDIYIMLGKAFLPHLEGLNSTQLRLVTIYANRISQARTGTPIDAN
HD
NT seq 4329 nt   +upstreamnt  +downstreamnt
atggaggaggcactggagctggcacgtgccaaagacaccaaggagcgaatggcggcggtg
gagcggctctatcaactcctcgaaggttctagaaagagcctcacttcttcggaagtcact
tcgcttgtcgattgctgcctggatctcctcaaggacaacaacttcagagtctctcagggc
gctctccaggctcttgcttccgccgccgtcctctccggtgatcacttgaagttgcatttc
aacgcgctcgttcccgcggttgttgaacggttaggtgacgccaaacagcccgttagagac
gccgccagacgcctactgctcactctcatggaggtttcttctccaacaattattgttgaa
agagctggctcttatgcctggacgcataaaagttggagagttcgggaagaatttgcacgt
acagtcacatcggcaatcagtctttttgcatctactgaacttccacttcaacgggctatt
cttccacctattttgcagatgctgaatgattcaaatcctggtgttcgtgaagcagctata
ttgtgcattgaggaaatgtatacgcaggctggaactcagttccgtgatgaacttcatcgc
catcagcttcctgcatctatggtgagagatattaatgctagattagagaaaattgagcca
caagttcgatcttcagatggaatgttgagtggttttggtgctggagagataaagcctgca
atccttaaccccaagaaaagcagtccaagagccaagagttcgagttcttcaagggagaca
tctctttttggaggtgaaagtgatatcacagaaaaacccatagatccaattaaagtttac
tcagataaggaactaataagggaatttgagaaaattgcttctacccttgtgccagaaaaa
gattggtccatacgcattgctgccatgcagagagttgaaggccttgtttctggaggtgct
accgattatccatgtttccggggactcctgaagcagcttgttggcccgctaagtacacaa
ttatcggatagaaggtcaagcatagtgaagcaggcttgccatttattatccttcttatca
aaggagctcttgggagattttgaggcatgtgccgagatgttcatcccagtccttttcaag
ttggttgtgattactgtgcttgtaattgcagagtccgcagataactgcataaaaacgatg
ttgcgtaactgcaaagctgcccgtgtgcttccccgcatagctgattgtgcgaagaatgac
cgtagttctgtactccgtgctaggtgtgtcgagtacgcgttgttgatacttgaacattgg
ccagatgcaccagaaatacagcgatcggctgatttatatgaggaccttattaggtgttgc
gttgcagatgcaatgagtgaggtacgatcaactgctagaatgtgctacagaatgttcacc
aaaacttggccagatcgttctcgtcgcttgttctcattctttgatcctgtcattcaaagg
ataattaacgaagaagatggagggatgcataggcggcatgcttctccttctctccgtgac
agaaatatacagatgccattttcctctcaaacttctgctccttcaaatcttcctggatat
ggaacgtctgctatagttgcaatggacagaacttcaagtttatcctcagggacttctctc
tcttctggtttgattctatcccagtcaaagccccttgggaaaggtgctgaacgtactctg
gagagtgtgttgcatgcaagcaaacagaaagtcagtgccattgaaagtatgcttagagga
ctggacatatctgaaaaacagaggtcatcaagtttggatctaggagttgaccctccatca
tctcgtgatccaccattccctgctactgttccagcttctaatagtctcacaagctcttta
ggagtagaatcaactacctctagtgttggtaaaggtagtaaccgcaatggtggtatgatt
atgtctgacatcattactcaaattcaagcttccaaagattcaggcaagttatcatataga
agtagtgtggcaactgagtctttgccagctttcccattatactctgccaaaagggcatct
gaaagacaagagcgaggttctgttgaagagaacagtgacattagggaggctaggcggttt
ataaatccacatgttgacagacaatatttggacacaccttatagagatgtaaacactaag
gattcacagaacaattatattccaaacttccagaggccacttttgagaaaacatgtagct
gggcggatgtctgcaggaaggagaaagagttttgatgatagccagctgtcacttggagag
atgtcaaattatgttgaaggtcctgcttctctcagtgatgccctcagtgaggggctcagt
cctagttctgattggtgtgctagggttgctgcttttacttatctccggtctttgctgcag
cagggaccaaaaggtattcaggaagtggttcagaattttgagaaggtaatgaaactgttt
ttccagcacttggatgatccccaccataaagttgcacaggctgccctttcaactcttgca
gatattattccatcatgtcgaaagccctttgagagttacatggaaagaatcttaccccat
gttttttcacggttaattgatccaaaggagttggttaggcaaccttgctcaacgactttg
gaaattgttagcaaaacttatagcatagattctctcttacctgctttgctgcgttcatta
gatgaacagcgatcaccaaaggcaaagttggctgttattgagtttgctattagttccttc
aacaagcatgctatgagttctgaaggttctggtaatattggcatcctgaagttatggctt
gctaaattgatgccattggtccatgacaaaaatactaagcttaaggatgcagctatttct
tgcattatatctgtctactcacactttgatccgactgcagttctgaattttattcttagt
ttatcagttgaagaacaaaattcattgagacgggcacttaaacagtacactcctcgtatt
gaggtggacctaataaactatttgcagaacaagaaagaaaggcagcgtgctaagtcttcc
tatgatccatctgatgttgttggaacatcatctgaagaaggatatattggtgtgtccaag
aagagtcttttacttggaaggtattctgctggttcccttgatagtgaaggtggtaggaag
tggggttccacccaggattcaaccctgatcgcaagcagtattggccaggcaacatctgat
gaaactcaggagaacttatatcagaactttgagtccagtgcaaatgcagatgctcttcct
ttgaaaaccaaagaattgtcctacattgttaattcgggtcagagcttgggatctcgaact
ggccgggtggagaactttgaaagcggtgttaacctggaaagtctatctactccacgtttg
gaaatgaatggtctgagtagatctgactctttgggggccattgaagggcttggacataat
aatgagacttcatctgacttggatcttaatcatcttaaacctgcagctgtaaaggttagc
tctatgccagacactgggcctagcattcctcaaattcttcacctgatctgcaatgggaat
gatgagagccctactgcaagtaagcgcagtgcacttcagcaattaattgaaatttctctg
gctaatgatttctccatttggaacaagtacttcaatcagattttgacagctgtacttgaa
gttgtagatgattctgattcctcaatccgagaacttgccttatcattgatagttgaaatg
cttaaaaaccagaaagatgctatggaagattctgttgaaatagtgattgagaagctgctt
catgtaacaaaagatattgttcccaaagtttcaagcgaagctgagcactgcttgaacacc
gtgttgtctcaatatgatccattcagatgtttaagtgttattgtacctttattagtcact
gaagatgagaagactctggttatttgcataaactgtttaacaaagcttgtagggcggcta
tcacaggaggaactaatggttcaattgccctcatttttgcctgctctttttgaagccttt
ggaaaccagagtgcagacgtccggaagacagtcgttttctgtttagtggatatttatata
atgcttgggaaagcatttttgccacacttggaggggcttaacagcacacagttgcggttg
gttacaatttatgcgaatcggatctcacaggccaggactggcacccccatagatgctaac
catgattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (19)   
   Pfam (19)   
All databases (57)   

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