KEGG   Thermobacillus composti: Theco_0933
Entry
Theco_0933        CDS       T02394                                 
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
Organism
tco  Thermobacillus composti
SSDB
Motif
Pfam: tRNA_U5-meth_tr TRAM Methyltransf_31 Methyltransf_25 Cons_hypoth95 MTS Methyltransf_11 Methyltransf_15 PrmA N6_N4_Mtase Methyltransf_12 Methyltransf_32
Other DBs
NCBI-ProteinID: AGA57123
UniProt: L0EA06
Position
complement(967609..969315)
AA seq 568 aa
MREHRRNGAGSGNGRPDAPGRKDKRSTEPGKGAAHAVAKRERSGADRAGATKVHDDADRA
EAKWGHDGANRAGVKRMRAGADRAGSKRVRAAAAPRASGREDAVRIADAAADELRPGDRI
VVTIKRIGINGEGVGYYKRKAVFVPGALPGEVVKAAVTGVDPNRLTARIAEIEKRSPHRV
RPACPVYDRCGGCQLQHMDYAGQLTAKEELVREAFARYAGLEEAELPLRPIIGMDEPWRY
RNKAQLQAGHKPGGGLALGLYEPGSRRLVDIAGCAVQHPAVSAAAERIRRLAERAGVPVG
AGPDGALRTVVLRVAPESGELQLTLVASAEQFPGRDRLVEAIRRELPQITSISVNVNRGS
SPLVFGERTRLLWGRPDLETRLGDLRFKLSPRAFFQLNPEQTVKLYDLAREAAALTGRET
VVDAYCGTGTIALWLAPHAREVRGIETIREAVDDAERNARLNGWTNARFYVGRAEELLPR
WVKQGFRPDVILVDPPRTGCDSALLRTVADVKPARFVYVSCNPSTLAKDCRVLLDAGYRI
EWVQPVDMFPQTSHVECVILLVRKGADG
NT seq 1707 nt   +upstreamnt  +downstreamnt
atgcgggaacatcgccggaatggcgcgggaagcggaaacggaaggccggacgcgcccgga
cggaaggacaagcggagcacggagcccgggaaaggcgcggcgcacgcggttgccaagcgg
gagcgaagcggcgcggaccgtgcgggggcgacaaaggtgcacgatgatgcggatcgtgcg
gaggcgaagtgggggcacgacggcgcaaaccgcgcgggagtgaagcggatgcgcgcgggt
gctgaccgggcaggttcgaagcgcgtgcgcgctgctgccgcgccccgggctagcggccgc
gaagacgccgtccggattgccgacgccgcagcggacgaactcaggccgggcgaccggatc
gtcgtgacgatcaagcggatcggcatcaacggcgaaggcgtcgggtactacaagcgcaaa
gccgtcttcgtgcccggcgccctgcccggcgaagtcgtaaaggcggccgtgaccggcgtg
gatccgaaccggctgacggcccggatcgcggagatcgagaagcgatcgccgcatcgggtg
aggcccgcctgccccgtgtacgaccgctgcggcggctgccagctgcagcatatggactac
gcgggccagctcacggcgaaggaagagctcgtgcgcgaagcgttcgcgcgctacgcgggc
ctcgaggaagcggagctgccgctgcgcccgatcatcggcatggacgagccctggcgctac
cgcaacaaggcgcagcttcaggcggggcataagccgggcggcgggcttgccctcggattg
tacgagccgggcagccgccggctcgtcgacatcgccgggtgcgcggtacagcacccggcc
gtgagcgcagccgccgagcggatccggcggctggccgagcgggccggcgtgccggtcggc
gccggcccggacggcgcgctgcgcaccgtcgtgctgcgagtcgcccccgaatcgggcgag
ctgcagctgacgctcgtcgcctccgccgagcagttccccggccgggaccggctcgtcgag
gcgatccgccgggagctgccgcagatcacctcgatctcggtcaacgtcaaccgcggcagc
tccccgctcgtcttcggcgagcgcacccggctgctctggggcaggcccgacctggagacg
cgcctcggcgacctgcgcttcaagctctcgccgcgcgccttcttccaactcaatccggag
cagacggtgaagctgtacgacctcgcgcgggaagcggccgccctgaccggccgggagacg
gtcgtcgacgcctactgcggcaccggcacgatcgccctctggctcgctccgcacgcgcgc
gaagtccgcggcatcgagacgatccgcgaagcggtcgacgacgcggaacgcaatgcccga
ctgaacggctggacgaacgcccgcttctatgtcgggcgggccgaagagttgctgccccgc
tgggtgaagcaaggcttccgccccgacgtcatcctcgtcgatccgccgcgcaccggatgc
gactccgccctgctgcggacggtcgccgacgtgaagccggcccgattcgtctacgtctcg
tgcaacccgtcgacgctcgcgaaggactgccgcgtgctgctcgatgcgggctataggatc
gaatgggtgcagccggtggacatgttcccgcagacgagccatgtggagtgtgtaattttg
ttggttagaaagggagccgatggctag

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (27)   

Download RDF
DBGET integrated database retrieval system