KEGG   Thermobacillus composti: Theco_2188
Entry
Theco_2188        CDS       T02394                                 
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
tco  Thermobacillus composti
Pathway
tco03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Theco_2188
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tco03021]
    Theco_2188
   03400 DNA repair and recombination proteins [BR:tco03400]
    Theco_2188
Enzymes [BR:tco01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Theco_2188
Transcription machinery [BR:tco03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Theco_2188
DNA repair and recombination proteins [BR:tco03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Theco_2188
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AGA58308
UniProt: L0EDF7
Position
complement(2267251..2267457)
AA seq 68 aa
MLYPSIDEMMKKVDSKYSLVVAAAKRARMLRDGAKSQLESPKSHKPVGVALEEIYHDLLA
IEQDSNAK
NT seq 207 nt   +upstreamnt  +downstreamnt
atgctgtatccatcgattgacgagatgatgaagaaggtcgacagcaaatattcgctcgtc
gtggcggccgccaaacgggcgagaatgctccgggacggcgccaagtcgcagctggagtcg
cccaaatcccacaagccggtcggcgtggcgctggaggaaatttaccacgatctcctcgcc
attgaacaagattcgaacgcgaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

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