KEGG   Thermomonospora curvata: Tcur_3068
Entry
Tcur_3068         CDS       T01127                                 
Name
(GenBank) DNA polymerase III, epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
tcu  Thermomonospora curvata
Pathway
tcu03030  DNA replication
tcu03430  Mismatch repair
tcu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tcu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Tcur_3068
   03430 Mismatch repair
    Tcur_3068
   03440 Homologous recombination
    Tcur_3068
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tcu03032]
    Tcur_3068
   03400 DNA repair and recombination proteins [BR:tcu03400]
    Tcur_3068
Enzymes [BR:tcu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Tcur_3068
DNA replication proteins [BR:tcu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Tcur_3068
DNA repair and recombination proteins [BR:tcu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Tcur_3068
SSDB
Motif
Pfam: RNase_T GIY-YIG Rv2179c-like DEDDh_C RNase_H_2
Other DBs
NCBI-ProteinID: ACY98610
UniProt: D1A8X2
Position
complement(3554804..3556621)
AA seq 605 aa
MSAFWTTVRPMTSTGAAEPPTGPGARGVQGTLDDLGTPLVDVTFVVVDLETTGGSPADSA
ITEVGAVKVRGGERLGEFATLVDPGVPIPPFITALTGITQQMVTNAPPMSAVLPAFLEFA
RGCVLVAHNAPFDIGFLRAACTAHDHPWPAFPVVDTADLARRVLTREEVPNCKLATLARY
FRTGTEPCHRALADARATVDVLHGLIERLGSYGVHSLEELRAFAKTPTPEQRRKRHLADG
MPSAPGVYLFEDARGEVLYVGKSNDLRARVRSYFTASETRRRIREMVGLAERVRPIVCAT
ALEAEVRELRLIAEHKPRYNRRSKFPERTLWLKLTVGETFPRLSIVRDCRDEQAVYLGPF
GSLRQAEEARAALHEAVPLRQCTQRLTPRLIAHGRARTCALGQIGRCGAPCEGRQSADVY
LRHVETARSIMEGDVRPVVAAARVRIDRLAVQLRYEEAAAQRDRLAAFVRAAARGQRLAA
LARCPQLVAARPAFGGGWELAVVRHGRLAAAGTVPQGASPWPHVEAAVATAETVIPGPGP
VGGAIPEEVECVLRWLEGPGTRLVELEGTWSSPVHGAEGLRAWLERAYAPLEPEDGFRRG
GRPLR
NT seq 1818 nt   +upstreamnt  +downstreamnt
atgtcggcgttctggactacggtacggcccatgacgtccacaggcgccgccgagccgccc
accggcccgggtgcccggggagtccagggcaccctcgacgacctcggcacgccgctggtg
gacgtcaccttcgtggtggtggacctggagaccaccggcggctcaccggccgactcggcg
atcaccgaggtcggcgcggtgaaggtgcgcggcggcgagcggctgggggagttcgccacc
ctggtcgatcccggcgtgccgatcccgccgttcatcacggcgctgaccggcatcacccag
cagatggtgacgaacgcgccgccgatgtcggcggtgctgccggccttcttggagttcgcc
cgcggctgcgtgctggtggcccacaacgcccccttcgacatcggcttcctgcgcgcggcc
tgcacggcccatgaccatccttggcccgccttccccgtggtcgacaccgccgacctggcc
cgccgcgtgctcacccgcgaggaggtgcccaactgcaagctggccacgctggcccgctac
ttccgcaccggcaccgagccgtgccaccgcgcgctcgccgacgccagggccaccgtggac
gtgctgcacgggctgatcgagcggctcggctcctacggggtgcactcgctggaggagctg
cgggccttcgccaagacccccacccccgaacagcggcgcaaacggcacctggccgacggc
atgcccagcgcccccggcgtctacctgttcgaagacgcccgcggcgaagtgctgtacgtg
ggcaaaagcaacgacctgcgcgcccgggtgcgctcctacttcaccgcctccgagacccgc
cgccggatccgcgagatggtgggcctggccgagcgcgtccggccgatcgtgtgcgccacc
gcgctggaggccgaggtccgcgaactgcgcctgatcgccgagcacaaaccccgctacaac
cgccgctcgaagttccccgaacggacgctgtggctgaagctgaccgtcggcgagaccttc
ccccgcctgtcgatcgtccgcgactgccgcgacgagcaggccgtctacctggggccgttc
ggctcgctccggcaggccgaggaggccagggccgcgctgcacgaggcggtgccgctgcgc
cagtgcacccagcgcctgacgccccgcctgatcgcccacggccgggcccgcacctgcgcg
ctcggccagatcggccgctgcggggcgccgtgcgagggccgccagtccgccgacgtctac
ctgcggcatgtggagacggcccgcagcatcatggagggcgacgtgcggcccgtggtggcc
gcggcccgggtgcgcatcgaccggctcgccgtgcagctgcgctatgaggaggcggcggcc
cagcgcgaccggctggcggcgttcgtgcgggcggcggcccggggccagcggctggccgcg
ctggcccgctgcccccagctggtggccgcccggcccgccttcggcggcggctgggagctg
gccgtggtgcggcacggcaggctcgccgccgccgggacggtcccccagggcgcctcgccc
tggccccatgtggaggcggcggtcgccaccgccgagaccgtcatccccggtcccggcccg
gtgggcggggccatccccgaagaggtggaatgcgtgctgcgctggctggagggtccgggc
acccggctggtggagctggagggcacctggagcagcccggtgcacggcgccgagggcctg
cgcgcgtggctggagcgcgcctacgccccgctcgaacccgaggacggattccgccggggc
ggccgcccactaaggtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (32)   

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