KEGG   Hydrogenovibrio crunogenus: Tcr_1100
Entry
Tcr_1100          CDS       T00296                                 
Name
(GenBank) ribosomal large subunit pseudouridine synthase E
  KO
K06181  23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
Organism
tcx  Hydrogenovibrio crunogenus
Brite
KEGG Orthology (KO) [BR:tcx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tcx03009]
    Tcr_1100
Enzymes [BR:tcx01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.20  23S rRNA pseudouridine2457 synthase
     Tcr_1100
Ribosome biogenesis [BR:tcx03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Tcr_1100
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: ABB41695
UniProt: Q31GM8
Position
complement(1182503..1183060)
AA seq 185 aa
MSELLLFNKPFNVLCQFTDEPEFKDQRQTLADFINQPGFYAAGRLDRDSEGLLLLTNDGK
LQQHIANPKHKQPKTYLVQVEGDINKEAIKQLQQGVTLKDGLTRPAKARKIPEPKWLWPR
NPPIRERKNIPTSWVELIITEGKNRQVRRMTAAVGFPTLRLIRTQIGDYQLKNLQPGESM
LIKNS
NT seq 558 nt   +upstreamnt  +downstreamnt
atgagtgaactgctgctttttaacaaaccttttaatgtgctgtgtcaatttacggatgaa
ccggagtttaaagatcagcgtcaaacactggcggattttattaatcaacccgggttttat
gcggccggtcgattggaccgagattccgaagggctcttactgctcaccaatgatggcaag
ctgcaacaacacattgccaacccaaaacataaacaacctaagacctatctggttcaagta
gaaggcgatatcaacaaagaggccatcaaacagttacaacaaggcgtcacgttaaaagat
ggcctgacccgccctgctaaagcgcggaaaatcccggaacccaagtggttatggccaaga
aacccgccaattcgtgagcgtaaaaatattccaacctcttgggtggagctgattattacc
gaaggaaagaaccgccaagtccgccgaatgaccgccgctgttggctttccaacactgaga
ttgattcgcactcaaattggcgactatcaacttaaaaacttacaaccgggcgaatccatg
ctcatcaaaaattcgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system