KEGG   Hydrogenovibrio crunogenus: Tcr_1444
Entry
Tcr_1444          CDS       T00296                                 
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
  KO
K10943  two-component system, response regulator FlrC
Organism
tcx  Hydrogenovibrio crunogenus
Pathway
tcx02020  Two-component system
tcx02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:tcx00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Tcr_1444
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    Tcr_1444
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:tcx02022]
    Tcr_1444
   02035 Bacterial motility proteins [BR:tcx02035]
    Tcr_1444
Two-component system [BR:tcx02022]
 Other families
  FlrB-FlrC (polar flagellar synthesis)
   Tcr_1444
Bacterial motility proteins [BR:tcx02035]
 Flagellar system
  Flagellar assembly proteins
   Others
    Tcr_1444
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA_2 HTH_30 AAA_16 Mg_chelatase MCM AAA_7 AAA HTH_28 OKR_DC_1_N nSTAND3 HTH_23 AAA_3 FleQ AAA_22 ATPase Myosin_head HTH_24 AAA_19 AAA_30 MerR
Other DBs
NCBI-ProteinID: ABB42036
UniProt: Q31FN7
Position
complement(1561069..1562448)
AA seq 459 aa
MSIAKILVVEDDKELQEALVDTLELNGFDVVSVGSAEEALVALDDEIAMVFTDIRMDGMN
GYDLMKRIRAIKPYLPIVLMTAYGTVEQAVEAMKSGAVDYILKPFEADVLVEKAKAYFYR
DASAEEDFVVADATTIQLKSMAKKVAESDASVLITGESGTGKEVLARFIHNHSTRSKQPF
VAINCAAIPENMLEATLFGYEKGSFTGAMKAMPGKFELAQGGTIFLDEIGEMKPDLQAKL
LRVLQEREVERIGSSKLIKLDVRVLSASNVDMKKAMADGNFREDLFYRLNVFPMRIPPLR
ERPKDIAAIAERLLQRHCGGRRVEPMMSAPAMRSLIQFQWPGNIRELDNVIQRALVMMSG
ETIQEQDILFDDSFHQDGETTQANGVKEMGRSDVEVLQPASIDGQSPSTDLKEREVQIIL
ETLKANNGHRQKTAEALNISPRTLRYKLARFKEQGLDVL
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgagtattgctaagattttagtggtagaagatgataaagaattacaagaagcattagtt
gataccttagagcttaatggatttgatgttgtttctgtcgggtccgccgaagaggcactt
gttgctttggatgatgaaattgccatggtttttaccgatattcgtatggatggtatgaat
ggctacgatttgatgaagcgtattcgagctattaagccatatcttcccattgtattgatg
acggcttatggaacggttgaacaagccgttgaagccatgaaatcaggcgcggtggattat
atattgaaaccatttgaagcagacgtattagtggaaaaagcgaaagcttatttttatcga
gacgcgtcggcagaagaggattttgtggtggccgatgcgacaactattcagctgaagtcg
atggcaaaaaaagtggcggaaagtgacgcttccgttttaattactggagaaagtgggact
gggaaagaggttctggctcggttcattcataatcattccacacgaagcaagcagcctttt
gttgccatcaactgtgcggctatccctgaaaacatgctggaagccaccttgtttggttat
gaaaaaggttcttttacaggcgcaatgaaagcaatgccaggtaagtttgagctggcccag
ggcggaaccatttttttagatgaaattggggaaatgaagccggatttgcaagccaaactg
ttaagggttttgcaagagcgagaagtggagcgcataggtagctctaagttgattaaactg
gatgtgcgtgtattaagtgcatccaatgttgatatgaaaaaagcgatggctgacggcaat
ttccgagaagatttgttttatcgtttaaatgtttttccaatgcgtattccgcctctgaga
gaacgtccaaaagacattgctgctattgcagagcgtttattacaacgtcattgtggcggc
cgaagagtggagccaatgatgtctgcgcctgccatgcgttcattaattcagtttcagtgg
ccaggaaatattcgtgagcttgataatgtcattcagcgggcattggtgatgatgtctggt
gaaacaatccaagaacaggatattttatttgatgacagttttcatcaagacggcgagact
acacaggcgaacggtgtgaaagaaatggggcgttcagacgtcgaagttctgcaacctgct
tcaatagatggtcagtcgccttcaacagacttgaaagagcgtgaagtacaaattatttta
gaaacgttaaaagcgaacaatggtcatcgtcaaaaaacggctgaggcattgaatattagt
ccaaggactttaagatataaattagcgcggtttaaagagcaagggttggacgttttataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (25)   
   Pfam (25)   
All databases (42)   

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