KEGG   Thiomicrospira cyclica: Thicy_1443
Entry
Thicy_1443        CDS       T01517                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
tcy  Thiomicrospira cyclica
Pathway
tcy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tcy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Thicy_1443
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tcy03400]
    Thicy_1443
Enzymes [BR:tcy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Thicy_1443
DNA repair and recombination proteins [BR:tcy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Thicy_1443
SSDB
Motif
Pfam: PriA_3primeBD PriA_C DEAD ResIII Helicase_C PriA_CRR AAA_30 AAA_16 AAA_11 AAA_22 PIF1 TrwB_AAD_bind AAA_19 cobW HypA zinc-ribbons_6 Zn_ribbon_SprT
Other DBs
NCBI-ProteinID: AEG32203
UniProt: F6DA72
Position
complement(1634291..1636525)
AA seq 744 aa
MTPSLRVQVALPGPFWQPLSYLLPDDVANQATVDLQAWSQGWLGWRVAVPFRNQTKIAVV
VGVNQDDGVDASKLKPLLHKLDDEPLFNAQDLAFLHWAASYYHEPLGEVVMAALPKRLRV
GKPLSLPGVVTWQRSVLGQTVSVDQLSARAHKQRALWQAFCDDQAWSSSQLNAAFSQWQP
LVKRWVEQGWLVVSEGACLAQKTLPASVRHSLNEEQAAAVAQVQASKGFRCFLLDGVTGS
GKTEVYLALIEQVLAQGKQVLVLVPEIGLTPQTAARFEAYLQQPVVALHSGLNDQERHCA
WQVMRRGEAQVMLGTRSALFTPFANLGLCILDEEHDLSFKQQDGFRYYARDLLIRRAQML
QIPVVLGSATPSMESLHNAQSGRFGYLRLSQRAANAQPPQLRLLDVRGDRLQEGLSNKAL
HQMREALAAGGQVLVFLNRRGFAPVLLCHSCGWQGSCSHCDANLTYHQASDSLKCHHCGF
QQPKPKACPACGATQFVALGQGTERLEQFLTQQFPTHSILRIDRDTTRLKGSLAEKVGQA
RDGAADILIGTQMLAKGHHFPKLTLVVMLDLDQGLFSVDFRGAERMAQLLVQVAGRAGRA
SQPGRVLIQTHQPEHPTYQQLLREGYAGFAADTLRDRQLANLPPFGFQLLVRVEAVDSNQ
AVAFLEAIKDLLLAVPVSQPCEVWGPVTAPMAKRQNRWRYQLLLQAETRGSLQAWWQAVA
ADVYAHPLANRIRWSIDVDPQETS
NT seq 2235 nt   +upstreamnt  +downstreamnt
atgacgccctcgctccgtgttcaagtcgcacttcccggcccattttggcagccgttaagc
tatctgttgcccgacgatgttgctaatcaagccactgtcgacctccaggcctggtcgcag
ggttggcttggttggcgcgttgcggtgccttttcgtaatcagaccaaaatcgcggtggtg
gtaggggttaatcaagacgatggtgtcgatgcaagtaagctgaaacccttgttgcacaag
cttgatgacgagccactattcaacgcacaggatttggcctttttgcactgggcggccagc
tattatcatgaacccttaggtgaggtggtgatggcggctttgccgaaacgcttgcgggtg
ggcaaacccttatccttaccaggggtggtgacctggcagcgctcggtattaggccagacg
gtcagtgtcgatcaactcagtgcgcgggcgcacaaacaacgagctctgtggcaggccttt
tgcgatgaccaggcctggtcatccagtcaactgaatgcggcatttagtcaatggcaacct
ttagtgaagcgatgggttgagcagggctggttagtggtcagtgaaggtgcctgtttggcg
caaaaaactctgccggcatcggtgcgccactctttaaatgaagaacaggctgcggcggta
gcgcaggtgcaggcttcgaagggttttcgttgttttttgcttgacggtgttactggtagc
ggtaaaaccgaggtgtatttggctttaattgaacaggtgttggcgcagggtaaacaagtt
ttggtgttggtgccggaaatcggtttaaccccgcaaacagcggcccgctttgaggcctat
ttgcaacaaccggtggtggctttgcactcgggccttaatgatcaagagcgtcactgtgcc
tggcaggtgatgcgtcgcggtgaggctcaggtgatgctgggtacgcgctcggctttgttt
acgccttttgctaatttgggcttgtgcattttggatgaagaacatgatctgtcctttaaa
caacaagatggttttcgttattacgcacgggatttactcattcggcgcgcgcagatgttg
caaattccggtggtgctgggctcagcaacgcccagcatggaaagtttgcataatgcgcaa
tcggggcgctttggctatttgcgcctgagtcagcgagcggccaatgcgcaaccaccgcag
ttgcgtttgttagatgtgcgtggtgatcgtttgcaagaaggcttgtcgaacaaagccttg
caccagatgcgcgaagccttagccgccggtgggcaggtgttggtgtttttaaaccgtcgt
ggttttgcgcccgtgttgctatgccatagctgtggttggcaggggagttgttcgcactgt
gatgccaatttaacctatcatcaggctagcgatagcttaaagtgccaccattgcgggttt
caacagccaaaacctaaggcttgtccagcttgtggcgccacccaatttgtggctttgggg
cagggaaccgagcgtttagagcagtttttaacccagcaatttccaactcatagcattttg
cggattgaccgagataccacgcggttaaaaggcagtttggcggaaaaagtggggcaggcg
cgggatggcgctgccgacattttgattggcactcaaatgttggctaaaggtcatcatttt
cctaagctgaccttggtggtgatgctcgatttagatcagggcttgtttagtgtcgatttt
cgtggtgccgagcgcatggcgcaactgttggttcaggtggccggtcgcgcggggcgagcc
agtcaacctggacgagtcttgattcaaacccaccaacccgaacatccgacctatcaacaa
ttattgcgcgaaggttatgccggttttgccgcggataccttgcgcgatcgacaattagcg
aacctgccgccgtttgggtttcagttgttggtgcgagtagaggcggtcgattccaaccaa
gcggtcgcgtttttagaggcgattaaagacttattattggctgtgccggttagccagccc
tgcgaggtgtggggcccggtgactgcgccgatggcgaaacggcaaaaccgctggcgttat
caattgttattgcaagcagaaacccgaggcagtctgcaggcctggtggcaagcagttgcg
gcagacgtttatgcccatccgttggcgaaccggattcgttggagcattgatgtcgatccg
caagaaaccagttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (44)   

Download RDF
DBGET integrated database retrieval system