KEGG   Thiomicrospira cyclica: Thicy_1469
Entry
Thicy_1469        CDS       T01517                                 
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
tcy  Thiomicrospira cyclica
Pathway
tcy03030  DNA replication
tcy03430  Mismatch repair
tcy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tcy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Thicy_1469
   03430 Mismatch repair
    Thicy_1469
   03440 Homologous recombination
    Thicy_1469
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tcy03032]
    Thicy_1469
   03400 DNA repair and recombination proteins [BR:tcy03400]
    Thicy_1469
Enzymes [BR:tcy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Thicy_1469
DNA replication proteins [BR:tcy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Thicy_1469
DNA repair and recombination proteins [BR:tcy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Thicy_1469
SSDB
Motif
Pfam: RNase_T Rv2179c-like YbjQ_1 RNase_H_2
Other DBs
NCBI-ProteinID: AEG32229
UniProt: F6DAH3
Position
1698105..1699181
AA seq 358 aa
MNTAQLILIDKRNQPLKDYIVAVAASDGLDIKGVQIIASPAKGEKALLTAGLRIPPLEDF
DFDTRKIAQHTLDQLLIDEQLVSCDQFISQASQDETVCTNLQKSKHKLALAIEALISEFT
QSSVTDLIRDNRNDALYKLKQQAKELNNKTILCLDIEATDISTNLEADILQLSVCDLEGN
EKLNQLYNPGYPIPPNEKHAITTEMVADAPKIEDCWPEIHALLQQADIILAYSTESDFSY
LKNSAEKKQLPFELDYAKWLDVAELSKELVGAMRWHSERMHWFWKTPKLTMAYERILNKP
FPGDAHDALADARATAELMQTMLKLGAKSDIKAKEPPKTDAKVSNNLFAMAFAKAKKK
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgaacacagcccaacttattcttattgataaacgcaaccaaccgcttaaagactatatt
gtggcggttgccgcttctgatggcctggatattaaaggcgtacaaatcatcgcctctccc
gctaaaggtgaaaaagccctactcacggccggcttgcgaatccccccgctcgaagacttt
gattttgatacccgaaaaatagctcaacacaccctagatcaactgcttatagatgagcaa
ctggtcagctgtgatcagtttattagccaagccagtcaagacgaaacggtttgcaccaat
ctgcaaaaatcgaagcataagttggccttggctattgaagcactgattagtgagtttact
caatccagtgtgactgatttgattcgcgataaccgcaatgatgccttatacaaactcaaa
cagcaggccaaagaactcaataacaaaaccattctctgcttagatattgaggcaaccgac
atttccactaacctggaagctgacattctgcaattatcggtatgcgaccttgagggtaac
gaaaagctcaatcaactttacaaccccggctatcctattccaccgaatgaaaaacatgcc
atcaccacagaaatggttgccgatgcccctaaaattgaagattgctggcccgagattcat
gccttgttacaacaagccgacattatcctagcctacagcaccgaaagtgattttagctat
ctcaaaaatagcgcagaaaaaaaacaactgccatttgagctggattacgcaaagtggctt
gatgtggccgaattaagtaaagaattggtcggtgccatgcgctggcattcagaacgaatg
cattggttttggaaaacgccgaaactgaccatggcttatgagcgcattttgaataaaccg
tttcctggtgacgcccatgatgccctcgccgatgcacgcgcaacggccgagttaatgcaa
accatgctaaaattgggtgcaaaatcagatattaaggcgaaagagccgccaaaaactgac
gcgaaagtttcaaataatttatttgccatggcatttgccaaggccaagaaaaaatag

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