KEGG   Sulfurimonas denitrificans: Suden_1208
Entry
Suden_1208        CDS       T00298                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
tdn  Sulfurimonas denitrificans
Pathway
tdn00470  D-Amino acid metabolism
tdn00550  Peptidoglycan biosynthesis
tdn01100  Metabolic pathways
tdn01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:tdn00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Suden_1208
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Suden_1208
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    Suden_1208
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:tdn01011]
    Suden_1208
Enzymes [BR:tdn01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     Suden_1208
Peptidoglycan biosynthesis and degradation proteins [BR:tdn01011]
 Precursor biosynthesis
  Amino acid ligase
   Suden_1208
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N GARS_A ATP-grasp CPSase_L_D2 ATP-grasp_4 ATP-grasp_3
Other DBs
NCBI-ProteinID: ABB44486
UniProt: Q30R95
Position
complement(1273978..1275015)
AA seq 345 aa
MKLTILFGGASFEHEISIVSAITLKEKLSNFELNFIFCDQDHTFYLINASKMRATTFSRG
EYKKMPKLTLSHGSFVQKSLFGSVDISGTVLNLIHGGDGEDGTIAAILDFFSIKYIGPRV
DASVFSYDKRYTKWLCHARGVKCVESQELSSSEHSNIKIAYPIIVKPSRLGSSIGVSIVK
DESKLDYALDSAFEFDNTVIVEPFLEGVKEYNLAGFSAGKKFYFSIIEEPQKEEFLDFEK
KYMDFSRSGNVDSAEISKELESKLRASFEKVYKNLFEGALIRCDFFVVNGEVFLNEINPI
PGSMANYLFDDFGGSLKLLANSLPHTKRAKVTYEYIHSISKAKGK
NT seq 1038 nt   +upstreamnt  +downstreamnt
ttgaagttaactattttattcggcggtgctagtttcgagcatgaaatcagcatagtaagt
gcaattacacttaaagaaaagctatcaaattttgagttaaattttattttttgtgaccaa
gaccatacgttttatctgattaacgcatcaaaaatgagagcaacaaccttctcaagaggt
gaatataaaaagatgccaaaactcactctctctcatggctcttttgttcaaaaaagtctc
tttggttctgtagatattagcggaactgttttaaaccttatccatggtggagatggggag
gatggaactattgcagcaatcctcgattttttctctatcaagtacattggaccaagagtt
gatgcgagtgtcttctcttatgataaaagatacacaaaatggctttgtcatgcaagaggt
gttaaatgtgtagaatcacaagagttaagctcaagtgaacactcaaatataaaaatagca
tatccaattatcgtaaaaccatcacgtcttggaagctctattggtgtgagtatagtaaaa
gatgagagtaagcttgattatgctcttgatagtgcatttgaatttgataatactgttata
gttgagccgtttttagaaggtgtaaaagagtataacttggctggttttagtgcaggtaaa
aagttctacttctccataattgaagagccacaaaaagaggagtttttggattttgagaaa
aaatatatggacttctcaagaagtggaaatgtagatagcgcagagataagcaaagagtta
gagtcaaaactaagagcaagttttgagaaagtttataaaaatctctttgaaggtgcacta
attagatgtgacttttttgtagttaatggcgaggtgtttctaaatgagataaatccaatt
ccagggtctatggcaaactacctttttgatgatttcgggggctctttaaaacttcttgca
aactcacttccacatacaaaaagagctaaagtaacttatgagtatattcactcaatatct
aaagccaaagggaagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (7)   
   Pfam (7)   
All databases (36)   

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