KEGG   Sulfurimonas denitrificans: Suden_1553
Entry
Suden_1553        CDS       T00298                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
tdn  Sulfurimonas denitrificans
Pathway
tdn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tdn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Suden_1553
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tdn03021]
    Suden_1553
   03019 Messenger RNA biogenesis [BR:tdn03019]
    Suden_1553
Transcription machinery [BR:tdn03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     Suden_1553
Messenger RNA biogenesis [BR:tdn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Suden_1553
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N Spore_III_AA ATPase_2 OB_RNB AAA AAA_25
Other DBs
NCBI-ProteinID: ABB44830
UniProt: Q30QA1
Position
1625005..1626348
AA seq 447 aa
MSEIDSQQPRKSINNKSSAKTRTHKPVKGVSVEDLRIKSIEDLTAMAVELNIEQPNELKR
QDLIFEILKAQTEQGGFILFSGILEIMQDGYGFIRSIDKSFDESINDAYVSNTQIKRFAL
RNGDVVTGQVRPPKEQERYYALIKIEAVNGLPPEESKKRPLFENLTPLYATEQIKLEYRE
KGLTGRMMDLFAPIGKGQRGLIVAPPRSGKTELLKEIAHGITHNHPEIDLMVLLVDERPE
EVTDMERSVKGEVYSSTFDMPAKNHVKVAEMVIEKAKRRVELGKNVVILLDSITRLARAY
NTVTPSSGKVLSGGVDANALHKPKRFFGAARNIENGGSLTIIATALVDTGSRMDEVIFEE
FKGTGNSEVILDRKIADRRIFPAIDILKSGTRKDELLIGPEVLQKVFILRQMIHKQDNEI
EALKFVYTTMGKKPTNEEFLESMNTNQ
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgagcgaaatcgattcacagcagcctcgcaaaagcattaacaacaaaagcagcgcaaag
acaagaacacacaaaccagtaaaaggtgtaagtgttgaagatcttcgcatcaagagtatt
gaagatttaacagctatggctgttgaactaaacatagaacaaccaaatgagctaaaacgc
caagacctcatctttgagatattaaaagcacaaacagaacaaggcggatttatcctcttt
agcggtattttagagattatgcaagatggttatggttttatccgctctattgacaagagt
tttgatgagagtataaacgatgcctatgtatcaaatacgcaaatcaaacgctttgctctg
cgtaacggagatgttgtcacagggcaagttagacctcctaaagagcaagagaggtactac
gcacttattaagatagaagccgttaatggccttcctcctgaagagagtaaaaaaagacct
ctctttgaaaacctcactccactttatgcaacagaacaaatcaaactagaatatagagaa
aaaggtctaactggccgtatgatggacctttttgctcctattggaaagggtcagcgtgga
cttatcgttgcacctccaagaagtggtaaaacagagcttttaaaagagattgctcatggt
atcacgcataatcatccagagatagatttgatggttttacttgttgatgagagacctgaa
gaggtaactgacatggagagaagtgttaagggtgaagtttatagctctacttttgatatg
cctgcaaaaaaccatgtaaaagtggctgaaatggttatagaaaaagcaaaaagacgcgtt
gagctaggtaaaaacgttgtgattttacttgactctatcactcgtcttgcacgtgcttac
aacacagttactccatcaagcggaaaagtcttaagcggtggtgttgatgcaaatgctctt
cataaaccaaagagattttttggagctgctcgtaatatagaaaatggtggaagtttaact
atcatcgcaactgcacttgttgatacaggaagcagaatggatgaagttatctttgaagag
ttcaaaggtactggtaactctgaggtaattcttgaccgtaaaattgccgatagaagaatc
ttcccagctattgatatattaaaatctggaacgagaaaagatgaacttctaataggtcct
gaagttctacaaaaagtatttattctacgtcaaatgattcacaaacaagacaatgagata
gaagcactcaaatttgtttacacaacaatgggtaaaaaacctacaaatgaagaattttta
gaaagtatgaatactaaccaatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (27)   

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