KEGG   Taylorella equigenitalis 14/56: KUK_0588
Entry
KUK_0588          CDS       T02604                                 
Symbol
rnr
Name
(GenBank) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
teg  Taylorella equigenitalis 14/56
Pathway
teg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:teg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KUK_0588 (rnr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:teg03019]
    KUK_0588 (rnr)
   03016 Transfer RNA biogenesis [BR:teg03016]
    KUK_0588 (rnr)
Enzymes [BR:teg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     KUK_0588 (rnr)
Messenger RNA biogenesis [BR:teg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     KUK_0588 (rnr)
Transfer RNA biogenesis [BR:teg03016]
 Prokaryotic type
  tRNA degradation factors
   KUK_0588 (rnr)
SSDB
Motif
Pfam: RNB CSD2 OB_RNB S1 OB_Dis3 RNase_II_C_S1 HTH_11 Rho_RNA_bind
Other DBs
NCBI-ProteinID: CCG17896
UniProt: I7JJG7
Position
652293..654764
AA seq 823 aa
MVSKKKISTPLDVPNSLALESGIQFDPDVPSREDILKFMREHKKQIGLDALSRHFNLTRE
SAIQGLAKRLSAMLRDTQLISVRQGYKINDNLDDLITGTVQGHRDGYGFLISDDSEEDIY
LPEREMLKVLHGDIVTVRVVGDNRGRPEGAIFEVLERGTTKLVGRILHEQGQWVVVPEDT
RIKHDIIIPNSDISKAKHGNVVVTEIVRQPTRYSQPLGKVIEVLGDIDDPGMEIEIAIRK
FDVPVLFSDATQKLAKTFPKELRPSDYKDRVDLRDVPFITIDGEDARDFDDAVYAELVNI
GSEKRKRMAWRLLVAIADVSHYVKPEDALDKDAQERGTSVYFPRRVIPMLPEVLSNGLCS
LNPNVDRLVLVCDMIISESGAKAGEISAYQFYNAVIHSHARTTYTQVWDMIQNESGPNSQ
KFKHVRPHILDLYQLFNTLYKQRQDRGAIDFDTIETKIISNEMGKIEQIVPFIRNNAHKL
IEECMLAANTCAADFIIAKKQQALFRIHEGPTTEKLQSLRDFLKNIGLTLEGGAEPESKH
YAKMIELAKARPDFQVIQTLALRSMQQAIYSPDNVGHFGLAYDAYTHFTSPIRRYPDLLV
HRVIKGILSKQKYSPKIEGYERVKGEPIKAYEHGVWERLGIQMSAMERRADEASKDVESW
LKCWFIRERTGEIFSGKVSSVTSFGLFVTLDTLYVDGLIHISELGADFFQFNESTHELIG
ERTGKRYKLGDTVHVQVASVNLEARKIDFLPVKGLSYSNVQKELMGMEEGIATQKSFRKK
AAKTKPQELKGMTSQQRRAKLKREQREEFKKTNSKKSSRKRKR
NT seq 2472 nt   +upstreamnt  +downstreamnt
atggtatcaaagaagaaaatctctactcctttggatgtgcccaattctctagctttagag
tctggtattcaattcgatccagatgtgcctagtcgcgaagacatcctgaaatttatgcgt
gagcataaaaaacaaattggcttggatgcattatctagacatttcaacttaactcgtgag
tctgctatacagggactagctaaaaggctctctgctatgcttcgggatactcaacttata
tctgttcgacagggttataaaattaacgataatcttgatgaccttatcacgggcacagtt
caaggtcatagagatgggtatggttttttaatatccgatgactcggaggaggatatttat
ctaccagaaagagagatgcttaaggtgcttcatggggatatagtcaccgtcagagtagtt
ggtgataatcgtggacgaccagaaggtgctatttttgaggttcttgaaaggggtactaca
aaattagtaggtaggattcttcatgaacaaggacaatgggttgttgtaccagaagataca
cgtattaagcatgacattatcattcctaatagtgacatttcgaaagcaaaacacggaaat
gtggtggtcactgaaatcgttaggcagccaactaggtattcacaacccttaggaaaagta
atagaagttttaggtgatattgacgatcctggcatggagattgaaattgcaattcgcaaa
tttgatgtgcctgttttgttttctgatgctactcaaaagttagcaaaaaccttccctaaa
gaacttcgtccttctgattataaagacagggtcgatcttagagatgtgccatttattact
atagatggtgaggacgctcgagatttcgacgatgcggtgtacgcagaacttgttaatata
ggctctgaaaaacgtaaacgtatggcatggcgattattagttgctattgccgatgtttct
cattatgtaaaaccagaggatgctttagataaagatgcccaagagcgtgggacttcagtt
tattttccaagacgtgttattcctatgcttccagaggtgctatctaatgggctttgttca
ttaaaccctaatgtagatcgtcttgtgttagtgtgcgacatgatcatatcagagtctggt
gctaaagcaggggagatctcagcttatcaattttataatgctgtaattcactctcatgca
cgaactacatatacgcaagtttgggatatgattcaaaatgaaagtggtccaaattcgcag
aaatttaagcatgttcgtcctcatattctagatttatatcagttgtttaataccctatat
aaacaaagacaagaccgtggcgcgatagatttcgatactattgaaactaaaatcataagt
aatgagatgggcaaaattgaacaaatagttccttttatcagaaataacgcccataagcta
attgaagaatgcatgctagccgcaaatacatgtgccgctgattttattattgccaaaaag
cagcaggccctgtttcgcatacatgaaggtcctactacagagaaactgcaatctcttaga
gatttcctgaagaatattgggcttactcttgaaggtggagccgaaccagaaagtaaacat
tacgccaagatgatagagttagctaaagctagaccagactttcaagttattcaaactctt
gctcttcgctcaatgcaacaagcaatatatagtcctgataatgtcggacattttggttta
gcttatgatgcttatacacatttcacatcacctataagacgttatcccgatttgttagtt
catagagttattaaagggatactgtcaaaacaaaaatatagcccaaaaattgaagggtat
gaaagagttaaaggtgaacctattaaagcatacgaacatggcgtatgggagaggcttgga
atccaaatgtcggctatggaacgtagggcagatgaagcttctaaagatgttgaatcatgg
cttaagtgttggtttattagagaacgtactggtgaaatttttagtggcaaagtatcttcg
gttacgtcctttgggctttttgtcacccttgatactttatatgtggatggtcttattcat
atctctgaacttggtgctgattttttccaatttaatgaatcgactcatgaattaatagga
gaaagaactggaaaacgatataaactcggtgacactgttcatgttcaagttgctagtgta
aatctggaagctagaaaaatagattttctcccagttaaaggattaagctattcaaatgtc
caaaaagaattaatgggcatggaagagggcattgccacccaaaaaagttttagaaaaaag
gcggcaaaaactaaaccccaagaacttaagggaatgacatcacaacaaagacgtgcaaaa
cttaaacgcgaacaaagagaagagtttaaaaaaactaattcaaaaaaatcttcccgtaaa
agaaaaagataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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