KEGG   Tenacibaculum todarodis: LPB136_02960
Entry
LPB136_02960      CDS       T04588                                 
Name
(GenBank) tRNA nucleotidyltransferase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
ten  Tenacibaculum todarodis
Pathway
ten03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ten00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LPB136_02960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ten03019]
    LPB136_02960
Enzymes [BR:ten01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     LPB136_02960
Messenger RNA biogenesis [BR:ten03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     LPB136_02960
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd HD tRNA_NucTran2_2 MIOX Ppx-GppA_III
Other DBs
NCBI-ProteinID: APG64387
UniProt: A0A1L3JGY5
Position
646742..648160
AA seq 472 aa
MQETYYKEAISAEIFQFISEAANQLQLKSYVIGGFVRDYILERGTAKDIDIVAVGSGIEL
AEKVASLLPNKPKVQVFKTYGTAMLRYKDVEIEFVGARKESYSEDSRNPEVSEGTLEDDQ
NRRDFTINALALSLNKDSFGKLLDPFNGITDLENKLIRTPLDPDITYSDDPLRMMRAIRF
STQLNFTIEEKSLQAISKNADRLKIITRERVIDELNKILSSPVPSIGFLHLEQTSLLPQI
LPELIALKGVEEVEGQKHKDNFYHTLEVVDNIAKYTEDVWLRWAALLHDIGKAPTKKFHK
KNGWTFHGHEFVGSKMVYKLFKRLKMPLNNKMKFVQKMVMLSSRPIVLATDVTDSAVRRL
IFDAGDDIEDLMTLCEADITTKNPKKFKRYHKNFEVVRAKIKEVEERDSVRNFQPPITGE
EIMKTFNLKPCREIGQIKEAIKEAILDGKIPNEYEASQQFMIEKGQQLGLKL
NT seq 1419 nt   +upstreamnt  +downstreamnt
atgcaagaaacgtattataaagaagcaatatctgctgaaatttttcaatttatttctgaa
gcagcaaatcagttacagctaaaaagttatgtaattggtggttttgtacgcgattatata
ttagaaagaggaactgccaaagatattgatattgttgcagttggaagcggtattgaacta
gctgaaaaagtggcaagtttactaccaaacaaacctaaagttcaagtttttaaaacctac
ggaacggcaatgttgcgttataaagacgtagaaattgaatttgttggagctcgtaaagaa
tcatattcagaagacagtagaaatccagaagtttctgaaggaactttagaagatgatcaa
aaccgaagagattttacaattaatgccttagcattgagtttaaataaagattccttcggg
aaattattagatccgtttaatggaataacagatttagaaaacaaactaattcgcacgcca
ctagatccagatattacctattctgacgatccattaagaatgatgcgtgctattagattt
tctacacaacttaactttactatcgaagaaaaatcgttgcaagcaatttctaaaaatgct
gaccgattaaaaataataaccagagaacgtgttattgatgaattgaataagattttgtca
tcgccagttccatcaataggatttttacatttagagcaaacgagtttattacctcaaatt
ctaccggaattaattgctttaaaaggagtagaggaagttgaaggacagaagcataaagat
aatttttatcatacgttagaggttgtagataatattgctaaatatactgaagatgtttgg
ttgcgttgggcagctttattgcatgatattggtaaagcaccaactaaaaaatttcataaa
aaaaatggttggacctttcatggacatgagtttgtaggttctaaaatggtttataagtta
tttaaacgcttaaaaatgccattgaacaataagatgaaatttgttcagaaaatggtgatg
ttaagctcaagaccaatagttttagcaactgatgttacagattctgctgtaagacgttta
atttttgatgctggtgatgatattgaagatttaatgacgctttgtgaagcagatattact
actaaaaatccgaagaaatttaaaagatatcataagaattttgaagttgtaagagctaaa
attaaagaggtagaagagcgcgatagtgttcgtaattttcagccaccaattactggtgaa
gaaattatgaaaacctttaatttaaagccgtgtagagaaattgggcagattaaagaagcc
ataaaggaagcaattttagatggtaaaataccaaatgaatacgaagcttctcagcaattt
atgattgaaaaagggcaacaattaggtttaaaactttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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