KEGG   Tetrahymena thermophila: TTHERM_00013290
Entry
TTHERM_00013290   CDS       T01020                                 
Name
(RefSeq) UV excision repair RAD23-like protein, putative
  KO
K10839  UV excision repair protein RAD23
Organism
tet  Tetrahymena thermophila
Pathway
tet03420  Nucleotide excision repair
tet04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tet00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    TTHERM_00013290
  09124 Replication and repair
   03420 Nucleotide excision repair
    TTHERM_00013290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:tet03051]
    TTHERM_00013290
   03400 DNA repair and recombination proteins [BR:tet03400]
    TTHERM_00013290
Proteasome [BR:tet03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    TTHERM_00013290
DNA repair and recombination proteins [BR:tet03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      TTHERM_00013290
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin Rad60-SLD Rad60-SLD_2 UBA_3 Ubiquitin_4 Ubiquitin_5 OTU1_UBXL Crinkler Dsc3_N UN_NPL4 YukD HBS1_N PIP5K
Other DBs
NCBI-GeneID: 7823209
NCBI-ProteinID: XP_001008308
TGD: TTHERM_00013290
UniProt: Q22RQ9
AA seq 373 aa
MKINIKTLKGTDFFDVNLEETATVAELKEKIATEKQKEKDTIKLVHKGKQLTEDSKTLGE
LGIKDNDFVILMFFQKKAEKEDAPQQAQSDTTSTTSAASTTATNPTTVPKPAVSQPATTQ
QTGSQGTGSDLLQGPELEAKIKEIESMGFERPKVLQALKAAYYNPERAVDYLLSGNIPKE
PSQQQSPLQGLQGPGVEQLAQLAQNPQFQHIAQAIRQNPALLQPVMQQLAQTNPDVARLL
QQNPQAFLQLLLAASENEGGQTLPPNAIQVTPEEKADIDDIISMGFDKNDALEAYITCDK
NKELAINYLFEARESGTLLSEHIQKEELEAAQQQSQNQNQQQQGNNPNQQQQQGGQGEGG
DNDDEDDDDFMYQ
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgaagatcaacattaagactttaaagggcactgatttttttgatgttaaccttgaagaa
actgctacagttgctgaattgaaggagaagattgctactgaaaagtaaaaggaaaaagat
actattaagttagttcataaaggtaaataattgaccgaagactctaagactcttggcgaa
cttggtattaaagataatgattttgttattctcatgttcttttaaaagaaagcagaaaaa
gaagatgctccataataagcttaatctgataccacttctactacctccgctgcctcaaca
actgctactaaccccactactgttcctaagcctgctgtttcctaacccgctacaacataa
taaacaggaagttaaggaacaggtagtgatctcctttaaggtcctgaattggaagccaaa
attaaagaaattgaatcaatgggttttgaaagacctaaggttctttaagctttgaaggcc
gcttattacaatcctgaaagagcagttgattatttactcagtggtaatattcctaaagaa
cctagttaataatagagtcctttacaaggcttacaaggtcctggtgttgaataattagct
taattagcttaaaatcctcaattccaacacattgcttaagctattcgttaaaaccctgct
cttctccaacctgtcatgtaataattagcttaaactaaccctgatgttgccagactttta
caataaaaccctcaagctttcttgcaactcctccttgctgcctctgaaaacgaaggtgga
taaaccttacctccaaatgccatccaagtcactcctgaagaaaaagctgatattgatgac
attatttctatgggttttgataaaaatgacgccttagaagcatatattacctgcgacaag
aacaaagaattagcaattaactatcttttcgaagcaagggaaagcggtactcttctttct
gaacacatccaaaaggaagaattagaagctgcataataataatcataaaactaaaattaa
taacaataaggtaataacccaaatcaataataataataaggtggataaggtgaaggtggt
gataatgatgatgaagatgacgatgattttatgtattaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (105)   
   KEGG ORTHOLOGY (1)   
   RefGene (100)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   TGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (129)   

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