KEGG   Tannerella forsythia: BFO_1641
Entry
BFO_1641          CDS       T01682                                 
Symbol
topA
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
tfo  Tannerella forsythia
Brite
KEGG Orthology (KO) [BR:tfo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tfo03032]
    BFO_1641 (topA)
   03400 DNA repair and recombination proteins [BR:tfo03400]
    BFO_1641 (topA)
Enzymes [BR:tfo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     BFO_1641 (topA)
DNA replication proteins [BR:tfo03032]
 Prokaryotic type
  DNA Topoisomerases
   BFO_1641 (topA)
DNA repair and recombination proteins [BR:tfo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BFO_1641 (topA)
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim Toprim_4
Other DBs
NCBI-ProteinID: AEW22172
UniProt: G8UMJ9
Position
complement(1747317..1749659)
AA seq 780 aa
MQKKLVIVESPAKAKTIEKFLGKDYRVMSSYGHIRDLKTKEFSIDIENDYAPQYVIPAEK
KKLVADLKKASQEATEVLLASDEDREGEAIAWHLAEVLDLNPQNTQRIVFHEITKNAILH
ALDTPRSLDIHLVNAQQARRVLDRIVGFEVSPILWRKVKPALSAGRVQSVAVRLIVERER
EVNDFVAEASYRVIATFILPDGKTLLKAELNRRLKDKDEVDRFLKACREASSEFIIDDIS
KKPLKKSPAPPFTTSTLQQEAARKLGFSVSQTMMVAQRLYESGFITYMRTDSVNLSSLAL
NTAKEAIFREYGEKYHQLRKYHTKSKGAQEAHEAIRPTYMDHPAINGNAQEKKLYDLIYK
RTIASQMADAELERTTISIGIGKMKDKFLATGEVVKFDGFLHVYRESADDEGEGEQENGL
LPAVQVKDVLGVQEITATERFTQRPPRYTEASLVRRMEELGIGRPSTYAPTIQTIQNREY
VVRGDKPGEERSFHAVTLKNGTITEAEKKEIVGADRNKLLPTDIGTVVNDFLMEYFPDIM
DYNFTASVEKEFDAIAEGELVWTKALDKFYRFFHPIVEKTAAVKTEHKVGERQLGIDPKS
GEPVFVKIGRYGPIVQIGLANPNDKQAPKPRFASLMKGQSIETISLEEALELFNLPRVIG
TFEDKEMTAAIGRFGPFVRHDNQFVSIPKTLSPYSITAEEAIALIEEKRNKEAQRYIKKF
EEEPGLEILNGRYGPYITFDKANYRIPKGVEAASLTLEECKKIIAEADEKPAKRKGAKKK
NT seq 2343 nt   +upstreamnt  +downstreamnt
atgcaaaaaaaactggttatcgtagagtctcctgcaaaagcaaaaaccatcgagaaattt
ttgggtaaagactatcgggtcatgtcgagttacggacacatccgcgacttgaagacgaaa
gagttcagtattgatattgagaatgattacgcaccgcaatacgtcattccagcggaaaag
aaaaagctggttgcagacttgaaaaaagcgtcgcaagaggcgacggaggtgctgctcgcg
tctgatgaagaccgcgaaggagaagccattgcctggcatttagccgaagtgctggatctg
aacccccaaaatacgcagcgcatcgtttttcacgagatcacgaagaacgcgatcctgcat
gcgctggatacgcctcgcagcctcgatatccatctggtcaatgctcagcaggcacgccgc
gtattagaccggatcgtaggttttgaggtgtcaccgattttatggcgcaaagtcaagccg
gcgctttcggccggacgggtgcagtcggtagccgtgcgcctgatcgtagagcgtgaacgc
gaagtgaacgacttcgtggccgaagcctcgtaccgggtcatcgctactttcatcctgccc
gacggaaaaacgctcctgaaagcggaactgaacagacgcctgaaagacaaggatgaggtc
gaccggtttctgaaagcatgccgggaagcaagttcggaatttatcatcgacgatatcagt
aaaaagccgctgaaaaaatcgccggctccgcccttcacgacttctacgttgcaacaggaa
gcggcgcgcaagctcggcttctccgtttcgcagacgatgatggttgctcaacgactttac
gaatcgggattcatcacatatatgcgtacggactcggtgaacctgagcagccttgccctg
aatacggccaaggaagcgattttccgcgaatacggggaaaagtatcatcagctacgcaag
tatcacacgaagagcaaaggcgcacaggaagcgcacgaagctattcgtccgacgtatatg
gatcatccggcaatcaacggaaacgcacaggagaaaaaactgtacgacctgatctacaaa
cgtacaatcgccagtcagatggccgatgccgaactggagcgcacgacgatctcgatcggt
atcggaaagatgaaagataaattcctcgctacgggcgaggtggtgaagttcgacggtttt
ctgcatgtctaccgcgagagcgcggacgacgagggagaaggcgagcaggaaaacggactg
ctcccggccgtgcaggtgaaagatgtgctcggcgtgcaggagatcaccgctacggaacgc
ttcacgcagcgtccgccgagatatacggaagccagtttggtgcgccgcatggaagagctg
ggtatcggacgtccgtctacgtacgcaccgacgatccagacgattcaaaaccgcgaatac
gtcgttcggggagataaaccgggcgaagaacgttccttccacgcggtcaccttgaagaat
gggacaatcacggaggcagaaaagaaagagatcgtcggagccgatcgcaacaagttgctt
ccgaccgacatcggcacggtagtcaacgatttcctgatggagtactttccggatattatg
gattacaacttcaccgccagcgtggagaaagaattcgatgccattgccgagggtgagctg
gtctggacgaaagcgctcgataaattctaccggttcttccatccgattgtagaaaaaaca
gccgcggtgaaaacagaacataaggtcggggagcgtcagctcggtatcgacccgaagagc
ggggagccggttttcgtcaaaatcggccgttacggtccgattgttcagatcgggctggcg
aatccgaacgacaagcaagcgcccaagccgcgtttcgcgtcactgatgaaaggtcagtct
atcgaaacgatctcgctcgaagaagcgctggagctttttaatctgccgcgtgtcatcggt
acgtttgaagacaaggagatgacggcagcgatcggccgattcgggccgttcgtgcgtcac
gacaaccaatttgtatccatccccaagacgctaagcccctactccatcacggccgaagag
gcgatcgcgctgattgaggaaaaacggaacaaggaggcgcagcgttacatcaaaaagttc
gaggaagagccgggactggaaattctgaacggacgttacgggccgtacatcacattcgac
aaagccaactaccgtatcccgaaaggcgttgaggccgcgtcgttgacgctcgaagagtgt
aaaaaaatcatcgccgaggccgacgaaaaaccggccaaaagaaaaggcgcaaagaagaaa
taa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (35)   

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