KEGG   Thermobifida fusca: Tfu_0004
Entry
Tfu_0004          CDS       T00265                                 
Name
(GenBank) DNA replication and repair protein RecF
  KO
K03629  DNA replication and repair protein RecF
Organism
tfu  Thermobifida fusca
Pathway
tfu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tfu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Tfu_0004
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tfu03400]
    Tfu_0004
DNA repair and recombination proteins [BR:tfu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Tfu_0004
SSDB
Motif
Pfam: SMC_N AAA_23 AAA_15 AAA_21 AAA_29 SbcC_Walker_B ABC_tran AAA_27
Other DBs
NCBI-ProteinID: AAZ54044
UniProt: Q47U20
Position
4988..6121
AA seq 377 aa
MHVSHLQLADYRSYEAAYLELEPGVSTFIGPNGQGKTNLVEAIGYVATHSSHRVAHDAPL
VRRGAQRAVIRAAVVRHGQTALIELEINPGRANRARLNRSPNTRMRDVLGILHTVLFAPE
DLALVKGDPGERRRFLDELLTARAPRYAGVRSDYERVLKQRNALLKSAAAQNLHHRGGRD
LPTLDVWDEHLAQIGAELLAARLALVAELQPLAAKAYGELTATQDPISLRYRCSATDEEL
DTTNRPQLVEILRAALLRARPDELRRGVSLVGPHRDDLQLWLNDLPAKGYASQGESWSYA
LALRLAGFELLRADGDDPVLLLDDVFAELDAERRRRLASYVRTAEQVLVTAAVPDDVPQE
LSGARFRVTGGSVERER
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgcacgtctcccaccttcagttggccgactaccggtcctacgaggccgcgtacctggag
ctggagccgggagtcagcaccttcataggcccgaacgggcagggcaagaccaacctggtc
gaagcgatcggctacgtcgccacccatagcagccaccgcgtggcccacgacgctcccctc
gtccgccgaggagcccaacgagccgtcatccgcgcggccgtggtccgccacggccaaact
gccctcatcgagctggagatcaaccctgggcgggccaaccgcgcccgcctgaaccgctcc
cccaacacccggatgcgcgacgtcctcggcatcctccacaccgtcctgttcgcccccgaa
gacctggccctggtcaaaggagacccgggggagcgccgccgcttcctcgacgagctgctg
accgcccgcgccccccggtacgcgggggtgcgctccgactacgaacgcgtcctcaaacag
cgcaacgcgctcctcaaatccgcagccgcccaaaacctccaccaccggggcggccgcgac
ctgcccacgctggacgtgtgggacgagcacctcgcccagatcggcgcggaactcctcgcg
gcacggctcgccctggttgcggaactccagcccttggccgcgaaagcctacggcgaactc
accgccacccaagacccgatcagcctgcgctaccgctgctcggccactgacgaggagctc
gacaccaccaaccgtccacagcttgtggaaatcctgcgcgctgcactgctgcgcgcccgc
cccgacgaactgcggcgcggtgtcagcctcgtcggcccccaccgcgacgacctgcagctg
tggctcaacgacctgccagccaagggctatgccagccaaggcgaatcctggtcgtacgcc
ctcgcgctgcggctcgccggcttcgaactgctccgcgccgacggcgacgaccccgtcctc
ctcctcgacgacgttttcgcggaactcgacgctgagcggcggcgccgcctcgcctcttac
gtccgcaccgcggaacaagtcctcgtcaccgctgccgtacccgacgatgtcccccaagaa
ctctccggggcacgattccgggtcacaggagggagcgtggaacgtgaacggtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

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