KEGG   Thermococcus gammatolerans: TGAM_0126
Entry
TGAM_0126         CDS       T00920                                 
Symbol
dp2
Name
(GenBank) DNA polymerase II large subunit DP2, intein containing (dp2/polC)
  KO
K02322  DNA polymerase II large subunit [EC:2.7.7.7]
Organism
tga  Thermococcus gammatolerans
Pathway
tga03030  DNA replication
Brite
KEGG Orthology (KO) [BR:tga00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TGAM_0126 (dp2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tga03032]
    TGAM_0126 (dp2)
Enzymes [BR:tga01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     TGAM_0126 (dp2)
DNA replication proteins [BR:tga03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    D-family DNA polymerases
     TGAM_0126 (dp2)
SSDB
Motif
Pfam: PolC_DP2 Intein_splicing zinc-ribbons_6 HypA TackOD1
Other DBs
NCBI-ProteinID: ACS32628
UniProt: C5A316
Position
complement(119069..123448)
AA seq 1459 aa
MGDELYSPGMKAYFESLQREIDRAYEIARKARSQGKDPSLDVEVPQATDMAGRVESLVGP
PGVAERIRVLVKEYGKELAALKVVDEIIEGKFGDLGSKERYAEQAVRTALAILTEGIVSA
PLEGIADVKIKRNTWADNSEYLALYYAGPIRSSGGTAQALSVLVGDYVRKKLGLDRFKPS
EEHIERMVEEIDLYHRAVTRLQYHPEADEVRLAMRNIPIEITGEETDKVEVSHRNVPGVE
TNHLRGGAILVLAEGVLQKAKKLVKYIDKMGVEGWDWIKEFVEAKEKGKSEEPKADESKA
EDSGAREEITEKVEKGFYYELYERFKANIAPNKKYTKEIIGGRPLFAEPSENGGFRLRYG
RSRVSGFATWSVNPATMLILDEFIAIGTQMKTERPGKGCIVTPATTVEGPIVKLKDGSVV
RVDDYETALRVKNEIEEILYVGDALVNFGDFVENNQTLLPANYVEEWWVQELVKAIEELY
EVELKPFSDNPREAIEEAAEYLEIDPDFLESLLRDPLRVRPSVELAIHLSKVLDIPFHPY
YTLYWNTLKPEEVEELQRALLNAQIEWDEFRKLKFARKVILDNDPRIKRYLELLGLPHRL
ERTEDRRKVIVVDYPWSAALLTPLGNLEWEFKAKPFHTVIDIINENNPIKLRDRGISWIG
ARMGRPEKAKERKMKPPVQVLFPIGLAGGQSRDIKKAAEEGKTAKVEIAFFRCPKCGHVG
PEHLCPVCGTRKELLWHCPKCNVDYPESEAKEFGFRCPRCDVELRPYAEREIKPSELLRR
AMENVKVYGIDRLKGVKGMTSGYKMAEPLEKGLLRVKNDVYVFKDGTIRFDATDAPITHF
KPKEIGVSVEKLRELGYTHDFEGKPLERDDQIVELKVQDIILSYEAGKYLLKVARFVDDL
LEKFYGLPRFYNAEKMEDLIGHLVIGLAPHTSAGIIGRIIGFSDVLVGYAHPYYHAAKRR
NCFPGDTRILVQIDGKPARITLRELYELFEGESYENMVYVRRKPKRDVKVYSFDPERGKV
VLTDIEDVIKAPSTDHLIRFELELGRSFETTVDHPVLVYENGKFVEKRAFEVKEGELIGV
YENDSIKPFKIERIKYVKPKDDFVFSLNAKSYHNVLINENVVTHQCDGDEDAVMLLLDAL
LNFSKYYLPEKRGGKMDAPLVVTTRLDPREVDSEVHNMDVVRYYPLEFYEATYEMKSPKE
IKFIERVEDRLGKPEMYEGIKFTHDTDDIGLGPKMSLYKQLGDMVEKVERQLALAERIRA
VDEHHVAETILNSHLIPDLRGNLRSFTRQEFRCVKCNTKYRRPPLTGRCPKCGGKIVLTV
SKGAVEKYLPTAKMLVTRYNVKDYTRQRICLTEKDIKTLFETVLPEKQRTLLGFSADVCE
KMIKERTGSSNGKNGYLDGFNGKNGKVGKAKTSKEVEKKNDAESRTKKKPSENLKKEVKK
EKAKAKRKKRISLDEFFGS
NT seq 4380 nt   +upstreamnt  +downstreamnt
atgggggatgagctctactcacccgggatgaaggcttacttcgaatcactccagagggag
attgacagggcctatgagatagcaagaaaagctcgctctcagggaaaagacccaagcctc
gacgttgaggttccccaagcaaccgatatggccggccgtgttgagagcctcgtgggtccg
ccgggcgtcgccgagaggatcagggttcttgtgaaggagtacggcaaggaattggctgcg
ctgaaggttgttgatgaaatcatcgagggcaagtttggcgaccttgggagcaaggagcgc
tatgctgagcaggccgtcagaactgccctcgcgatactcaccgagggtatagtctcagct
ccgctcgagggaatagctgatgtaaaaatcaagcgcaacacctgggccgacaacagcgag
tacctggccctctactacgccggcccgataaggagttccggcggaaccgctcaagcttta
agcgtcctcgtcggcgactacgtgaggaaaaagcttggcctcgaccgcttcaagccgagc
gaggagcatatagagaggatggtcgaggagatagacctctatcatagagccgttacgaga
ctgcagtatcacccagaggccgatgaggtaaggctcgcgatgaggaacatccccattgag
ataaccggtgaagagaccgataaggtggaagtgagtcacaggaacgttcccggtgtcgag
accaaccacctgcgcggtggagcgattctcgttttggcggagggtgtcctccagaaggcg
aaaaagctcgtcaagtacatagacaagatgggcgtggaaggctgggactggataaaggag
ttcgtggaggccaaagagaagggcaaatccgaggaacccaaggccgacgaatccaaggcc
gaagattccggagcgagggaggaaatcaccgagaaggtcgagaagggcttctactacgag
ctctacgagaggtttaaagccaacatcgcccccaacaagaagtacacgaaggagataatc
ggtggcaggcccctctttgccgagccttcagagaacggtggcttccgcctgcgctacgga
aggagtcgcgtcagcggtttcgcgacgtggagcgttaacccggccaccatgctaatcctc
gacgagttcatagcgataggaacgcagatgaagaccgagaggcctgggaagggctgtatc
gttacccccgcaaccactgttgaggggccaatagtcaagctcaaggacgggagcgtcgta
cgggttgacgactacgagacggctcttagggttaaaaacgaaattgaggagattctctac
gtcggagatgccctcgtgaacttcggcgacttcgttgagaacaaccagacgcttttgccg
gccaactacgtcgaggaatggtgggttcaggagctggtgaaggcaatcgaggaactctac
gaagtcgagctcaagcccttctccgacaacccgcgcgaggcaatagaagaggccgccgag
tacctcgaaatagaccccgatttccttgagagtcttttgagagacccgctccgcgtcagg
ccgagcgtcgagctggcgatacacctctcaaaggttctggacatacccttccacccctac
tacaccctctactggaacacgctgaagcctgaggaagtggaggaactccagagggctttg
ctaaacgcccaaatcgagtgggacgagttcaggaagctgaagttcgcgaggaaggtaatc
cttgacaacgaccccagaatcaagcgctacctcgagctcctcggcctgccccacaggctc
gagaggacagaggacaggaggaaggtcatcgtcgttgactacccgtggagcgccgctctg
ctcacgcctctcggcaaccttgagtgggagttcaaggctaagccgttccacacggtcatt
gatataatcaacgagaacaacccgataaagctccgcgacaggggaataagctggataggg
gccagaatgggcagacccgagaaggccaaggagaggaaaatgaagccccctgttcaggtg
ctcttcccgattggcctcgctggcgggcagagcagggacattaagaaggccgctgaggag
ggcaagaccgccaaggtcgagatagccttcttcaggtgcccgaagtgcggacacgttggc
cccgagcacctctgccccgtctgtgggacgaggaaggagctcctctggcactgccccaag
tgcaacgttgattatcctgaaagcgaggctaaggagttcggcttccgctgtccgcgctgt
gacgtcgagctgaggccctacgctgagagggaaataaagccctccgaactgctcagaagg
gcaatggagaacgtcaaggtctacggcatcgacaggctcaagggcgtcaagggtatgacc
tccggctacaaaatggccgagccccttgaaaagggcctcctgagggttaagaacgacgtt
tacgttttcaaggacggcacaatccgcttcgacgccaccgacgccccgataacccacttc
aagccgaaggagataggggtcagcgttgaaaagcttcgcgaacttggctacacccacgac
ttcgagggcaagccccttgaacgggacgaccagatagtcgagctgaaggttcaggacata
atcctctcctacgaggcgggtaaataccttctcaaggtcgcgcgcttcgttgatgacctg
cttgagaagttctacggtctgccgaggttctacaacgccgagaagatggaagacctgata
ggccacctcgtcatcggtttagcaccccacacctcggccggaatcatcggcaggataatc
ggcttctccgacgttttggtcggctacgcgcacccgtattatcatgcggcgaagaggagg
aactgcttccctggtgatacgagaattttagttcagattgatggaaaacccgcgaggata
acgctccgcgagctctacgagctgtttgaaggggaaagctacgagaacatggtctacgtg
agacggaagccgaagagggacgttaaggtttactctttcgaccccgagagagggaaggtc
gttctcaccgatatcgaggacgttataaaagctccaagcaccgaccacctgattcgcttc
gagctcgaactcgggaggagcttcgaaacgaccgtcgaccacccggttctcgtctacgaa
aatgggaagttcgtggaaaagagggccttcgaggtgaaggaaggggagttaattggagtt
tatgagaatgactccataaaaccattcaaaattgaacgcattaaatacgtcaagcctaaa
gatgactttgtgttctcattgaacgctaaaagctaccataatgtactaataaatgagaat
gttgtaacacatcaatgcgacggagatgaggacgctgtcatgctcctcctcgatgcgcta
ctaaacttcagcaagtattacctcccagagaagcgcggcggtaaaatggacgcaccgctg
gtcgtcaccacgaggctcgacccgcgcgaggttgacagcgaggtccacaacatggatgtc
gtccgctattatcccctcgaattctatgaggccacctacgagatgaaatcgccgaaggaa
atcaagttcatcgagcgcgttgaagaccgccttggaaagcccgagatgtacgaggggata
aagttcactcacgatacggacgatataggcctgggcccgaagatgagcctgtacaaacag
ctcggcgacatggtcgagaaggtcgagagacagctcgctttagctgagcggattcgcgcg
gtcgatgagcaccacgtggctgagacgatactcaactcccacctgattcccgacctaagg
ggcaacctgaggagcttcacgagacaggagttccgttgcgtgaagtgcaacacgaaatac
aggaggccgccccttaccggccgctgtccgaagtgcggtggaaaaatcgtcctgacggtt
agcaaaggcgcggtggaaaagtacctgcccactgcaaagatgctggtcacccgctataac
gtcaaggactacacgaggcagaggatttgcctgaccgagaaggacataaagacgctcttc
gagaccgttttgcccgaaaagcagaggactttgctcggcttctctgcggacgtctgcgag
aagatgattaaggagaggactggttcttccaacggaaagaacggctacctcgacggcttc
aacggaaagaacgggaaggtggggaaagcgaagactagcaaagaggttgaaaagaagaat
gatgcagaatcccggacaaagaaaaagccctcggagaacctcaagaaggaagtcaagaag
gagaaggcgaaggccaagaggaagaagcgcataagcctcgacgagttcttcgggagttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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