KEGG   Toxoplasma gondii: TGME49_202690
Entry
TGME49_202690     CDS       T01093                                 
Symbol
POLR2I, RPB9
Name
(RefSeq) DNA-directed RNA polymerase II RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
tgo  Toxoplasma gondii
Pathway
tgo03020  RNA polymerase
tgo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tgo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    TGME49_202690 (POLR2I)
  09124 Replication and repair
   03420 Nucleotide excision repair
    TGME49_202690 (POLR2I)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tgo03021]
    TGME49_202690 (POLR2I)
   03400 DNA repair and recombination proteins [BR:tgo03400]
    TGME49_202690 (POLR2I)
Transcription machinery [BR:tgo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     TGME49_202690 (POLR2I)
DNA repair and recombination proteins [BR:tgo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      TGME49_202690 (POLR2I)
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C IBR DpnI Zn_ribbon_recom
Other DBs
NCBI-GeneID: 7894457
NCBI-ProteinID: XP_018637389
UniProt: A0A125YUP0
Position
VIIa:join(3102935..3102969,3103449..3103592,3104039..3104307,3104840..3104935,3105447..3105655)
AA seq 250 aa
MMGKSMMFCPECNNMLYPREDKEKRQLQFLCRQCDYSRYPKKTDTAQHIVERTNFNFKSK
EDIVISSDLSKDPTLGRVFDWRCPRCRGVGGVFYQLPERVAEDAMTLVYVCTQPGCGAWE
IQQPDGQGTGEDGRREKEDDSLSSPSEPRGAPFRLHEAKVEEDESSVAGALEAGALSVKR
AAAEAQDEDREAEFGDAPLGGEVEEDDDLFGEREEEEILESQDAFDEDDPYTHRLEPQDG
SVGELDVTFD
NT seq 753 nt   +upstreamnt  +downstreamnt
atgatggggaagtcgatgatgttttgtccggagtgcaacaacatgttgtatccgagagaa
gacaaggagaaacgccagctgcagttcctctgccgacagtgcgactactcgcggtatccg
aagaaaactgacacggcgcagcacatcgtcgagcgaacgaacttcaacttcaagtccaag
gaggacatcgtgatctcttcggatctgtcgaaagatccaacgttaggtcgtgtgttcgac
tggcgatgtcctcgatgccggggcgttggcggcgtcttctaccaactcccagaacgcgtc
gcagaagatgccatgacgctcgtctacgtctgcacccaacctgggtgtggagcctgggag
attcagcagcctgatgggcagggcacaggcgaagacggcagaagagaaaaggaagacgac
tcgctctcgtcgcccagcgaaccgagaggagctccttttcgtctgcacgaggcgaaagtg
gaagaagatgaaagttctgtcgccggcgccttggaggcgggtgcgctctctgtgaagcga
gcagcggctgaggcgcaggacgaggaccgagaggcagagttcggagacgctccacttggc
ggcgaagtcgaggaagacgacgacttgtttggcgagcgcgaggaagaagaaattctcgag
tcccaagacgccttcgacgaagacgacccgtacacccaccgtctcgagccgcaggacgga
tctgtgggagagctcgacgtcacgtttgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (42)   

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