KEGG   Thioalkalivibrio sulfidiphilus: Tgr7_0097
Entry
Tgr7_0097         CDS       T00840                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
tgr  Thioalkalivibrio sulfidiphilus
Pathway
tgr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tgr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Tgr7_0097
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tgr03019]
    Tgr7_0097
   03009 Ribosome biogenesis [BR:tgr03009]
    Tgr7_0097
Enzymes [BR:tgr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Tgr7_0097
Messenger RNA biogenesis [BR:tgr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Tgr7_0097
Ribosome biogenesis [BR:tgr03009]
 Prokaryotic type
  rRNA helicases
   Tgr7_0097
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII AAA_30 CMS1 AAA_19 Flavi_DEAD
Other DBs
NCBI-ProteinID: ACL71201
UniProt: B8GTE1
Position
104296..106104
AA seq 602 aa
MNTDNDTVAGFDALGLNPAVLKALTDTGYEAPTPIQAEGIPPLLAGRDLLGQAQTGTGKT
AAFALPALSRLDLKDNRTQVLVLAPTRELAIQVAEAFQTYARHLPGFHVLPIYGGQPYGI
QLKQLSRGAQVVVGTPGRVMDHMRRGTLKLDALRTLVLDEADEMLRMGFIDDVEWILEQT
PASRQVALFSATMPEVIRRVAHTHLKEPAEVRIRSATTTATTIRQRYWRVSGLHKLDALT
RLLETEPFDAMLIFVRTKTETVELAERLTARGHACEALNGDIPQNQRERVVERLKKGQLD
ILVATDVVARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRTGEAILFVAPREQRML
KAIERATRQPIEPMHMPTAGDVNAQRIARFKERINEALGSDDLEPFLELVTDYQQETGAE
PLEIAAALARLAQGKEPLLLDERAPPPPRAEFMPRPERDTGRAEKPRPRKSGAHSEAPLP
LKGQPDVAMERFVVDVGHAHGLKPGNLVGAIANEAGLDSQYIGHIDIGDETTTVDLPADM
PRPLLKHLQGVWVCGRKLGLRPFGEPSPAQAHKRGPKGPRRPAGSAARKPAPRKTLSKPR
KG
NT seq 1809 nt   +upstreamnt  +downstreamnt
ttgaataccgacaatgacaccgtggccggctttgacgcccttggcctgaatcccgccgtt
ctgaaggccctgaccgatacgggctatgaagcgcccacgcccatccaggccgagggcatc
ccgccgctgctggccggacgcgacctgctcggccaggcccaaaccggcaccggcaagacc
gccgccttcgccctgcccgccctgtcgcgcctggatctcaaggacaaccgcacccaggtg
ctggtgctggcgccgacccgcgaactggccatccaggtggccgaggccttccagacctac
gcccggcacctgcccggcttccacgtgctgcccatctacggcggccagccttacggcatc
cagctcaagcagctgagccggggcgcccaggtggtggtgggtacgccgggccgcgtcatg
gaccacatgcgccgcggcaccctcaagctcgacgccctgcgcaccctggtgctggacgag
gcggacgagatgctgcgcatgggttttatcgacgacgtggagtggatcctggagcagacc
ccggcctcccgccaggtggccctgttctcggccaccatgcccgaggtgatccgccgggtg
gcccacacccacctgaaggaaccggccgaggtgcgcatccgttccgccaccaccacggcc
accaccatccgccagcgctactggcgggtcagcgggctgcacaagctggatgcgctcacc
cggctgctggagactgagcccttcgacgccatgctcatcttcgtgcgcaccaagaccgag
acggtggagctggccgagcggctcaccgcccggggccatgcctgcgaggccctgaacggt
gatatcccccagaaccagcgcgagcgggtggtggagcgcctcaaaaagggccagctggac
atcctggtggccaccgacgtggtggcgcggggcctggacgtggaacgcatcagccatgtg
ctgaactacgacatcccccacgacaccgaatcctacgtgcatcgcatcggacgcaccggc
cgcgccgggcgcaccggcgaggcgatcctgttcgtggcgccccgggagcagcgcatgctc
aaggccatcgagcgggccacgcgccagcccatcgagcccatgcacatgcccaccgccggc
gacgtcaacgcccagcgcatcgcccgtttcaaggaacgcatcaacgaggcactgggttcc
gacgacctggaaccgttcctggaactggtgacggactaccagcaggagaccggtgcagag
cccctggagatcgccgccgccctggcccggctcgcccagggcaaggagcccctgctgctg
gacgaacgcgccccgccgccgccccgcgccgagttcatgccccgcccggagcgcgacacc
ggccgcgcggagaagcccaggccgcgcaagtctggcgctcattcggaggcgccgctgccg
ctcaagggccagcccgacgtggccatggagcgcttcgtggtggacgtgggtcatgcccac
ggcctgaagcccggcaacctggtgggtgccatcgccaacgaggcgggcctggacagccag
tacatcggccacatcgacatcggcgacgagaccaccaccgtggacctgcccgccgacatg
ccccgccccctgctcaagcacctgcagggggtctgggtgtgcggccgcaagctgggtctg
cgccccttcggcgagccatcccccgcccaggcgcacaaacggggtcccaagggacccaga
cgtcccgccggctccgccgcgcgcaagccggcgccgagaaagaccctgtccaagccacgc
aagggttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (27)   

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