KEGG   Thioalkalivibrio sulfidiphilus: Tgr7_1024
Entry
Tgr7_1024         CDS       T00840                                 
Name
(GenBank) exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
tgr  Thioalkalivibrio sulfidiphilus
Pathway
tgr03030  DNA replication
tgr03430  Mismatch repair
tgr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tgr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Tgr7_1024
   03430 Mismatch repair
    Tgr7_1024
   03440 Homologous recombination
    Tgr7_1024
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tgr03032]
    Tgr7_1024
   03400 DNA repair and recombination proteins [BR:tgr03400]
    Tgr7_1024
Enzymes [BR:tgr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Tgr7_1024
DNA replication proteins [BR:tgr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Tgr7_1024
DNA repair and recombination proteins [BR:tgr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Tgr7_1024
SSDB
Motif
Pfam: RNase_T CAF1
Other DBs
NCBI-ProteinID: ACL72111
UniProt: B8GP22
Position
complement(1111187..1111897)
AA seq 236 aa
MSFLSTLFGNHPNLDPGIEDRLARWRALPEPSARTSLDEARFVVIDVETTGLDLSRSELL
SVGLVPVGPHGIELGGLDEIVLRREVTRIDKDNLVVHGISPTESAAGVDIHEALSSVLER
IGKTWLVAFHADFDRIILGRTLRKQLGVKLRNPFLDLAMLLPALYSEGTAGLKGLDDWLG
HFAIPCPVRHRASADALVTAELLLLALAEARRQNHNDLRALDGLAQTQAKLHLMRH
NT seq 711 nt   +upstreamnt  +downstreamnt
atgagtttcctgagcactctgttcggcaaccaccccaacctcgatccgggcatcgaggac
cgcctcgcccgctggcgcgccctgccggagccctcggcccgcaccagcctggacgaggcc
cgcttcgtggtcatcgacgtggagaccaccggtctcgatctcagccgcagcgagctgctg
tccgtgggcctggtgccggtgggccctcatgggattgaactgggcggcctggacgagatc
gtgctgcgccgcgaggtgacccgcatcgacaaggacaacctggtggtgcacggcatctcg
cccacggaatccgccgccggcgtggacatccacgaggccctctccagcgtgctggagcgc
atcggcaagacctggctggtggccttccacgccgacttcgatcgcatcatcctgggccgc
accctgcgcaagcagctgggcgtgaagctgcgcaacccgttcctggatctggccatgctg
ctgcccgccctctacagcgagggcaccgcaggcctcaagggcctggacgactggctcggc
catttcgccatcccctgcccggtgcgccaccgggcctcggcggatgccctggtgacggcg
gaactcctgctcctggcgctggccgaggcacgacgccagaaccataacgatctcagggcc
ctggacgggctggcgcagacccaggcgaagctgcacctgatgcgccactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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