KEGG   Taeniopygia guttata (zebra finch): 100190183
Entry
100190183         CDS       T01082                                 
Symbol
POLR2K
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC4
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu03020  RNA polymerase
tgu03420  Nucleotide excision repair
tgu04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100190183 (POLR2K)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100190183 (POLR2K)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    100190183 (POLR2K)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tgu03021]
    100190183 (POLR2K)
   03400 DNA repair and recombination proteins [BR:tgu03400]
    100190183 (POLR2K)
Transcription machinery [BR:tgu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     100190183 (POLR2K)
  RNA polymerase III system
   RNA polymerase III
     100190183 (POLR2K)
  RNA polymerase I system
   RNA polymerase I
     100190183 (POLR2K)
DNA repair and recombination proteins [BR:tgu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100190183 (POLR2K)
SSDB
Motif
Pfam: DNA_RNApol_7kD A2L_zn_ribbon MCM_OB DUF5816 Cytochrome_C7 HypA DZR zinc_ribbon_13
Other DBs
NCBI-GeneID: 100190183
NCBI-ProteinID: NP_001232686
Ensembl: ENSTGUG00000018366
UniProt: B5FYP8
Position
2:131669775..131673281
AA seq 58 aa
MDSQKDVQPPKQQPMIYICGECHTENEIKARDPIRCRECGYRIMYKKRTKRLVVFDAR
NT seq 177 nt   +upstreamnt  +downstreamnt
atggattcacagaaggacgttcagcctccaaagcagcagccaatgatttatatttgtgga
gaatgtcatacggaaaatgaaataaaggcaagagatcctatcaggtgcagagaatgtggc
tacaggataatgtacaagaaaaggaccaaaagattggtagtttttgatgctcgatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (104)   
   KEGG ORTHOLOGY (1)   
   RefGene (99)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (8)   
   Pfam (8)   
All databases (130)   

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